janelia-cellmap / cellmap-segmentation-challenge

Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for training 2D and 3D models, workflows for prediction and post-processing on out-of-memory arrays, and evaluation of results against validation data.

Date Created 2024-07-11 (8 months ago)
Commits 513 (last one 6 days ago)
Stargazers 27 (0 this week)
Watchers 5 (0 this week)
Forks 6
License bsd-3-clause
Ranking

RepositoryStats indexes 626,055 repositories, of these janelia-cellmap/cellmap-segmentation-challenge is ranked #608,756 (3rd percentile) for total stargazers, and #322,307 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #123,287/127,352.

janelia-cellmap/cellmap-segmentation-challenge is also tagged with popular topics, for these it's ranked: machine-learning (#8,201/8351),  artificial-intelligence (#2,192/2249),  segmentation (#664/671)

Other Information

janelia-cellmap/cellmap-segmentation-challenge has 4 open pull requests on Github, 49 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 9 open issues and 41 closed issues.

Homepage URL: https://janelia-cellmap.github.io/cellmap-segmentation-challenge/

Star History

Github stargazers over time

303025252020151510105500Aug '24Aug '24Sep '24Sep '24Oct '24Oct '24Nov '24Nov '24Dec '24Dec '2420252025Feb '25Feb '25Mar '25Mar '25

Watcher History

Github watchers over time, collection started in '23

5555554.54.544444413 Feb13 Feb15 Feb15 Feb17 Feb17 Feb19 Feb19 Feb21 Feb21 Feb23 Feb23 Feb25 Feb25 Feb27 Feb27 FebMar '25Mar '2503 Mar03 Mar05 Mar05 Mar07 Mar07 Mar09 Mar09 Mar11 Mar11 Mar13 Mar13 Mar

Recent Commit History

513 commits on the default branch (main) since jan '22

60060050050040040030030020020010010000Aug '24Aug '24Sep '24Sep '24Oct '24Oct '24Nov '24Nov '24Dec '24Dec '2420252025Feb '25Feb '25Mar '25Mar '25

Yearly Commits

Commits to the default branch (main) per year

40040035035030030025025020020015015010010050500020242024

Issue History

Total Issues
Open Issues
Closed Issues
5050454540403535303025252020151510105500Oct '24Oct '24Nov '24Nov '24Dec '24Dec '2420252025Feb '25Feb '25Mar '25Mar '25

Languages

The primary language is Python but there's also others...

PythonPythonShellShellDockerfileDockerfile
Opengraph Image
janelia-cellmap/cellmap-segmentation-challenge

updated: 2025-03-08 @ 11:23pm, id: 827359115 / R_kgDOMVB_iw