KalinNonchev / gnomAD_DB

This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. It extracts from a gnomAD vcf the minor allele frequency for each variant.

Date Created 2021-05-06 (3 years ago)

Commits 90 (last one 6 months ago)

Stargazers 38 (0 this week)

Watchers 3 (0 this week)

Forks 10

License mit

Ranking

RepositoryStats indexes 584,353 repositories, of these KalinNonchev/gnomAD_DB is ranked #522,637 (11th percentile) for total stargazers, and #422,423 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #101,702/116,326.

KalinNonchev/gnomAD_DB is also tagged with popular topics, for these it's ranked: database (#2,446/2596), annotation (#167/172)

Other Information

There have been 13 releases, the latest one was published on 2023-11-04 (about a year ago) with the name gnomAD V4.

All Topics

gnomad database genetics annotation variant-analysis rare-variant-analysis

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31 commits on the default branch (master) since jan '22

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updated: 2024-11-14 @ 04:49pm, id: 364799863 / R_kgDOFb5ndw