KalinNonchev / gnomAD_DB

This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. It extracts from a gnomAD vcf the minor allele frequency for each variant.

Date Created 2021-05-06 (3 years ago)

Commits 90 (last one 7 months ago)

Stargazers 38 (0 this week)

Watchers 3 (0 this week)

Forks 10

License mit

Ranking

RepositoryStats indexes 595,856 repositories, of these KalinNonchev/gnomAD_DB is ranked #530,949 (11th percentile) for total stargazers, and #427,587 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #104,006/119,431.

KalinNonchev/gnomAD_DB is also tagged with popular topics, for these it's ranked: database (#2,473/2626), annotation (#168/176)

Other Information

There have been 13 releases, the latest one was published on 2023-11-04 (about a year ago) with the name gnomAD V4.

All Topics

gnomad database genetics annotation variant-analysis rare-variant-analysis

Star History

Github stargazers over time

Watcher History

Github watchers over time, collection started in '23

Recent Commit History

31 commits on the default branch (master) since jan '22

Yearly Commits

Commits to the default branch (master) per year

Issue History

Languages

The primary language is Python but there's also others...

updated: 2024-11-14 @ 04:49pm, id: 364799863 / R_kgDOFb5ndw