KalinNonchev / gnomAD_DB

This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. It extracts from a gnomAD vcf the minor allele frequency for each variant.

Date Created 2021-05-06 (3 years ago)
Commits 90 (last one 10 months ago)
Stargazers 43 (0 this week)
Watchers 3 (0 this week)
Forks 10
License mit
Ranking

RepositoryStats indexes 626,090 repositories, of these KalinNonchev/gnomAD_DB is ranked #525,139 (16th percentile) for total stargazers, and #415,082 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #103,316/127,343.

KalinNonchev/gnomAD_DB is also tagged with popular topics, for these it's ranked: database (#2,457/2704),  annotation (#169/182)

Other Information

There have been 13 releases, the latest one was published on 2023-11-04 (about a year ago) with the name gnomAD V4.

Star History

Github stargazers over time

454540403535303025252020151510105500Jul '21Jul '2120222022Jul '22Jul '2220232023Jul '23Jul '2320242024Jul '24Jul '2420252025

Watcher History

Github watchers over time, collection started in '23

44443333332222Sep '24Sep '24Oct '24Oct '24Nov '24Nov '24Dec '24Dec '2420252025Feb '25Feb '25Mar '25Mar '25

Recent Commit History

31 commits on the default branch (master) since jan '22

3535303025252020151510105500Jul '22Jul '2220232023Jul '23Jul '2320242024Jul '24Jul '2420252025

Yearly Commits

Commits to the default branch (master) per year

60605050404030302020101000202120212022202220242024

Issue History

Total Issues
Open Issues
Closed Issues
303025252020151510105500Jul '21Jul '2120222022Jul '22Jul '2220232023Jul '23Jul '2320242024Jul '24Jul '2420252025

Languages

The primary language is Python but there's also others...

PythonPythonJupyter NotebookJupyter NotebookShellShell

updated: 2025-02-20 @ 05:35pm, id: 364799863 / R_kgDOFb5ndw