tbepler / topaz

Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.

Date Created 2017-11-06 (7 years ago)

Commits 283 (last one 6 months ago)

Stargazers 172 (0 this week)

Watchers 13 (0 this week)

Forks 64

License gpl-3.0

Ranking

RepositoryStats indexes 579,555 repositories, of these tbepler/topaz is ranked #197,904 (66th percentile) for total stargazers, and #165,293 for total watchers. Github reports the primary language for this repository as Jupyter Notebook, for repositories using this language it is ranked #4,616/16,901.

tbepler/topaz is also tagged with popular topics, for these it's ranked: machine-learning (#3,573/7877), pytorch (#2,673/5914), object-detection (#520/1149), cnn (#218/540)

Other Information

tbepler/topaz has 4 open pull requests on Github, 21 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 25 open issues and 87 closed issues.

There have been 1 release, the latest one was published on 2022-03-11 (2 years ago) with the name Release v0.2.5.

All Topics

cnn topaz cryoem cryo-em pytorch topaz-em denoising topaz-denoise machine-learning object-detection particle-picking positive-unlabeled

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Recent Commit History

67 commits on the default branch (master) since jan '22

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The primary language is Jupyter Notebook but there's also others...

updated: 2024-10-27 @ 03:11pm, id: 109742434 / R_kgDOBoqJYg