tbepler / topaz

Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.

Date Created 2017-11-06 (7 years ago)

Commits 503 (last one 18 days ago)

Stargazers 183 (0 this week)

Watchers 13 (0 this week)

Forks 65

License gpl-3.0

Ranking

RepositoryStats indexes 609,392 repositories, of these tbepler/topaz is ranked #195,785 (68th percentile) for total stargazers, and #167,557 for total watchers. Github reports the primary language for this repository as Jupyter Notebook, for repositories using this language it is ranked #4,605/18,095.

tbepler/topaz is also tagged with popular topics, for these it's ranked: machine-learning (#3,544/8200), pytorch (#2,638/6097), object-detection (#522/1196), cnn (#212/563)

Other Information

tbepler/topaz has 2 open pull requests on Github, 23 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 22 open issues and 104 closed issues.

There have been 2 releases, the latest one was published on 2025-01-14 (18 days ago) with the name Release v0.3.7.

All Topics

cnn topaz cryoem cryo-em pytorch topaz-em denoising topaz-denoise machine-learning object-detection particle-picking positive-unlabeled

Star History

Github stargazers over time

Watcher History

Github watchers over time, collection started in '23

Recent Commit History

287 commits on the default branch (master) since jan '22

Yearly Commits

Commits to the default branch (master) per year

Issue History

Languages

The primary language is Jupyter Notebook but there's also others...

updated: 2025-01-31 @ 03:11am, id: 109742434 / R_kgDOBoqJYg