Trending repositories for topic medical-image-segmentation
Easy-to-use image segmentation library with awesome pre-trained model zoo, supporting wide-range of practical tasks in Semantic Segmentation, Interactive Segmentation, Panoptic Segmentation, Image Mat...
SAM2-UNet: Segment Anything 2 Makes Strong Encoder for Natural and Medical Image Segmentation
A collection of resources on applications of Transformers in Medical Imaging.
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
A comprehensive review of techniques to address the missing-modality problem for medical images
Using DUCK-Net for polyp image segmentation. ( Nature Scientific Reports 2023 )
[arXiv] The official code for "UltraLight VM-UNet: Parallel Vision Mamba Significantly Reduces Parameters for Skin Lesion Segmentation".
A contrastive learning based semi-supervised segmentation network for medical image segmentation
A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
A comprehensive review of techniques to address the missing-modality problem for medical images
SAM2-UNet: Segment Anything 2 Makes Strong Encoder for Natural and Medical Image Segmentation
Using DUCK-Net for polyp image segmentation. ( Nature Scientific Reports 2023 )
[arXiv] The official code for "UltraLight VM-UNet: Parallel Vision Mamba Significantly Reduces Parameters for Skin Lesion Segmentation".
A collection of resources on applications of Transformers in Medical Imaging.
A contrastive learning based semi-supervised segmentation network for medical image segmentation
A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
Easy-to-use image segmentation library with awesome pre-trained model zoo, supporting wide-range of practical tasks in Semantic Segmentation, Interactive Segmentation, Panoptic Segmentation, Image Mat...
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
Easy-to-use image segmentation library with awesome pre-trained model zoo, supporting wide-range of practical tasks in Semantic Segmentation, Interactive Segmentation, Panoptic Segmentation, Image Mat...
SAM2-UNet: Segment Anything 2 Makes Strong Encoder for Natural and Medical Image Segmentation
Using DUCK-Net for polyp image segmentation. ( Nature Scientific Reports 2023 )
[arXiv] The official code for "UltraLight VM-UNet: Parallel Vision Mamba Significantly Reduces Parameters for Skin Lesion Segmentation".
Computation-Efficient Era: A Comprehensive Survey of State Space Models in Medical Image Analysis
A collection of resources on applications of Transformers in Medical Imaging.
A comprehensive review of techniques to address the missing-modality problem for medical images
[BMVC 2024] Official repository of the paper titled "MSA^2 Net: Multi-scale Adaptive Attention-guided Network for Medical Image Segmentation"
NeurIPS 2023: Towards Generic Semi-Supervised Framework for Volumetric Medical Image Segmentation
[CVPR 2024 Extension] 160K volumes (42M slices) datasets, new segmentation datasets, 31M-1.2B pre-trained models, various pre-training recipes, 50+ downstream tasks implementation
[CVPR 2024] VoCo: A Simple-yet-Effective Volume Contrastive Learning Framework for 3D Medical Image Analysis
A PyTorch framework for medical image segmentation
[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.
This repo provides the official code for : 1) TransBTS: Multimodal Brain Tumor Segmentation Using Transformer (https://arxiv.org/abs/2103.04430) , accepted by MICCAI2021. 2) TransBTSV2: Towards Bette...
A contrastive learning based semi-supervised segmentation network for medical image segmentation
A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
SAM2-UNet: Segment Anything 2 Makes Strong Encoder for Natural and Medical Image Segmentation
A comprehensive review of techniques to address the missing-modality problem for medical images
[BMVC 2024] Official repository of the paper titled "MSA^2 Net: Multi-scale Adaptive Attention-guided Network for Medical Image Segmentation"
Using DUCK-Net for polyp image segmentation. ( Nature Scientific Reports 2023 )
[arXiv] The official code for "UltraLight VM-UNet: Parallel Vision Mamba Significantly Reduces Parameters for Skin Lesion Segmentation".
NeurIPS 2023: Towards Generic Semi-Supervised Framework for Volumetric Medical Image Segmentation
Computation-Efficient Era: A Comprehensive Survey of State Space Models in Medical Image Analysis
[CVPR 2024 Extension] 160K volumes (42M slices) datasets, new segmentation datasets, 31M-1.2B pre-trained models, various pre-training recipes, 50+ downstream tasks implementation
[CVPR 2024] VoCo: A Simple-yet-Effective Volume Contrastive Learning Framework for 3D Medical Image Analysis
A PyTorch framework for medical image segmentation
[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.
This repo provides the official code for : 1) TransBTS: Multimodal Brain Tumor Segmentation Using Transformer (https://arxiv.org/abs/2103.04430) , accepted by MICCAI2021. 2) TransBTSV2: Towards Bette...
A collection of resources on applications of Transformers in Medical Imaging.
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
Easy-to-use image segmentation library with awesome pre-trained model zoo, supporting wide-range of practical tasks in Semantic Segmentation, Interactive Segmentation, Panoptic Segmentation, Image Mat...
A contrastive learning based semi-supervised segmentation network for medical image segmentation
A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
Easy-to-use image segmentation library with awesome pre-trained model zoo, supporting wide-range of practical tasks in Semantic Segmentation, Interactive Segmentation, Panoptic Segmentation, Image Mat...
SAM2-UNet: Segment Anything 2 Makes Strong Encoder for Natural and Medical Image Segmentation
[CVPR 2024 Extension] 160K volumes (42M slices) datasets, new segmentation datasets, 31M-1.2B pre-trained models, various pre-training recipes, 50+ downstream tasks implementation
A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.
A collection of resources on applications of Transformers in Medical Imaging.
Replacing Mamba with xLSTM! It works better. We show that xLSTM-Unet can be an effective semantic segmentation backbone.
Official repo for Medical Image Segmentation Review: The Success of U-Net
The largest pre-trained medical image segmentation model (1.4B parameters) based on the largest public dataset (>100k annotations), up until April 2023.
[CVPR 2024] VoCo: A Simple-yet-Effective Volume Contrastive Learning Framework for 3D Medical Image Analysis
Official code for ResUNetplusplus for medical image segmentation (TensorFlow & Pytorch implementation)
[arXiv] The official code for "UltraLight VM-UNet: Parallel Vision Mamba Significantly Reduces Parameters for Skin Lesion Segmentation".
PraNet: Parallel Reverse Attention Network for Polyp Segmentation, MICCAI 2020 (Oral). Code using Jittor Framework is available.
Official Pytorch Code base for "UNeXt: MLP-based Rapid Medical Image Segmentation Network", MICCAI 2022
[IMAVIS] Official implementation of "ASF-YOLO: A Novel YOLO Model with Attentional Scale Sequence Fusion for Cell Instance Segmentation".
A PyTorch framework for medical image segmentation
(TMI-2024) Source-Free Active Domain Adaptation (SFADA) for GTV Segmentation across Multiple Hospitals
A Comprehensive Survey of Mamba Architectures for Medical Image Analysis: Classification, Segmentation, Restoration, and Beyond
(TMI-2024) Source-Free Active Domain Adaptation (SFADA) for GTV Segmentation across Multiple Hospitals
A Comprehensive Survey of Mamba Architectures for Medical Image Analysis: Classification, Segmentation, Restoration, and Beyond
A comprehensive review of techniques to address the missing-modality problem for medical images
[BMVC 2024] Official repository of the paper titled "MSA^2 Net: Multi-scale Adaptive Attention-guided Network for Medical Image Segmentation"
SAM2-UNet: Segment Anything 2 Makes Strong Encoder for Natural and Medical Image Segmentation
Code for the paper "SelfReg-UNet: Self-Regularized UNet for Medical Image Segmentation "
[CVPR 2024 Extension] 160K volumes (42M slices) datasets, new segmentation datasets, 31M-1.2B pre-trained models, various pre-training recipes, 50+ downstream tasks implementation
[IMAVIS] Official implementation of "ASF-YOLO: A Novel YOLO Model with Attentional Scale Sequence Fusion for Cell Instance Segmentation".
[ISBI 2023] Official Pytorch implementation of "CMU-Net: A Strong ConvMixer-based Medical Ultrasound Image Segmentation Network"
Replacing Mamba with xLSTM! It works better. We show that xLSTM-Unet can be an effective semantic segmentation backbone.
3D Medical Image Segmentation Models，集成各种医学图像分割模型的小框架，主要是3D，持续更新...
[CVPR 2024] VoCo: A Simple-yet-Effective Volume Contrastive Learning Framework for 3D Medical Image Analysis
Official implementation of "Exploiting Scale-Variant Attention for Segmenting Small Medical Objects"
The official codes for the work "MSVM-UNet: Multi-Scale Vision Mamba UNet for Medical Image Segmentation".
MICCAI 2023: DHC: Dual-debiased Heterogeneous Co-training Framework for Class-imbalanced Semi-supervised Medical Image Segmentation
Official code for ResUNetplusplus for medical image segmentation (TensorFlow & Pytorch implementation)
Using DUCK-Net for polyp image segmentation. ( Nature Scientific Reports 2023 )
[arXiv] The official code for "UltraLight VM-UNet: Parallel Vision Mamba Significantly Reduces Parameters for Skin Lesion Segmentation".
Computation-Efficient Era: A Comprehensive Survey of State Space Models in Medical Image Analysis
SAM2-UNet: Segment Anything 2 Makes Strong Encoder for Natural and Medical Image Segmentation
[CVPR 2024] VoCo: A Simple-yet-Effective Volume Contrastive Learning Framework for 3D Medical Image Analysis
Replacing Mamba with xLSTM! It works better. We show that xLSTM-Unet can be an effective semantic segmentation backbone.
[CVPR 2024 Extension] 160K volumes (42M slices) datasets, new segmentation datasets, 31M-1.2B pre-trained models, various pre-training recipes, 50+ downstream tasks implementation
[arXiv] The official code for "H-vmunet: High-order Vision Mamba UNet for Medical Image Segmentation".
Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hierarchical relationships in the data.
This the repo for the paper tiltled "AgileFormer: Spatially Agile Transformer UNet for Medical Image Segmentation"
The official codes for the work "MSVM-UNet: Multi-Scale Vision Mamba UNet for Medical Image Segmentation".
Code for the paper "SelfReg-UNet: Self-Regularized UNet for Medical Image Segmentation "
Official implementation of "Exploiting Scale-Variant Attention for Segmenting Small Medical Objects"
A Comprehensive Survey of Mamba Architectures for Medical Image Analysis: Classification, Segmentation, Restoration, and Beyond
[BMVC 2024] Official repository of the paper titled "MSA^2 Net: Multi-scale Adaptive Attention-guided Network for Medical Image Segmentation"
A comprehensive review of techniques to address the missing-modality problem for medical images
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
Easy-to-use image segmentation library with awesome pre-trained model zoo, supporting wide-range of practical tasks in Semantic Segmentation, Interactive Segmentation, Panoptic Segmentation, Image Mat...
[arXiv] The official code for "UltraLight VM-UNet: Parallel Vision Mamba Significantly Reduces Parameters for Skin Lesion Segmentation".
A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
A collection of resources on applications of Transformers in Medical Imaging.
Computation-Efficient Era: A Comprehensive Survey of State Space Models in Medical Image Analysis
[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.
SAM2-UNet: Segment Anything 2 Makes Strong Encoder for Natural and Medical Image Segmentation
[CVPR 2024] VoCo: A Simple-yet-Effective Volume Contrastive Learning Framework for 3D Medical Image Analysis
Replacing Mamba with xLSTM! It works better. We show that xLSTM-Unet can be an effective semantic segmentation backbone.
The largest pre-trained medical image segmentation model (1.4B parameters) based on the largest public dataset (>100k annotations), up until April 2023.
[CVPR 2024 Extension] 160K volumes (42M slices) datasets, new segmentation datasets, 31M-1.2B pre-trained models, various pre-training recipes, 50+ downstream tasks implementation
Official repo for Medical Image Segmentation Review: The Success of U-Net
[ICCV 2023] A curated list of resources on implicit neural representations in Medical Imaging
PraNet: Parallel Reverse Attention Network for Polyp Segmentation, MICCAI 2020 (Oral). Code using Jittor Framework is available.
Official Pytorch Code base for "UNeXt: MLP-based Rapid Medical Image Segmentation Network", MICCAI 2022
[arXiv] The official code for "H-vmunet: High-order Vision Mamba UNet for Medical Image Segmentation".
A PyTorch framework for medical image segmentation
[MedIA Journal] An ultimately comprehensive paper list of Vision Transformer/Attention, including papers, codes, and related websites
[CVPR 2024] VoCo: A Simple-yet-Effective Volume Contrastive Learning Framework for 3D Medical Image Analysis
Replacing Mamba with xLSTM! It works better. We show that xLSTM-Unet can be an effective semantic segmentation backbone.
SAM2-UNet: Segment Anything 2 Makes Strong Encoder for Natural and Medical Image Segmentation
[arXiv] The official code for "H-vmunet: High-order Vision Mamba UNet for Medical Image Segmentation".
[CVPR 2024 Extension] 160K volumes (42M slices) datasets, new segmentation datasets, 31M-1.2B pre-trained models, various pre-training recipes, 50+ downstream tasks implementation
Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hierarchical relationships in the data.
NeurIPS 2023: Towards Generic Semi-Supervised Framework for Volumetric Medical Image Segmentation
Official implementation of TransNetR: Transformer-based Residual Network for Polyp Segmentation with Multi-Center Out-of-Distribution Testing (MIDL 2022)
[IMAVIS] Official implementation of "ASF-YOLO: A Novel YOLO Model with Attentional Scale Sequence Fusion for Cell Instance Segmentation".
Using DUCK-Net for polyp image segmentation. ( Nature Scientific Reports 2023 )
[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.
[ICCV 2023] A curated list of resources on implicit neural representations in Medical Imaging
[ECCV'24] Alternate Diverse Teaching for Semi-supervised Medical Image Segmentation
[IJCAI 2023] Co-training with High-Confidence Pseudo Labels for Semi-supervised Medical Image Segmentation
MICCAI 2023: DHC: Dual-debiased Heterogeneous Co-training Framework for Class-imbalanced Semi-supervised Medical Image Segmentation
[MICCAI 2023] MDViT: Multi-domain Vision Transformer for Small Medical Image Segmentation Datasets (an official implementation)
[MICCAI 2024] CUTS: A Deep Learning and Topological Framework for Multigranular Unsupervised Medical Image Segmentation