Trending repositories for topic medical-imaging

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

医学影像数据集列表 『An Index for Medical Imaging Datasets』

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

Medical Image Segmentation with Diffusion Model

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

Pytorch pipeline for 3D image domain translation using Cycle-Generative-Adversarial-networks, without paired examples.

[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.

cuCIM - RAPIDS GPU-accelerated image processing library

Brainchop: In-browser 3D MRI rendering and segmentation

A collection of resources on applications of multi-modal learning in medical imaging.

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

Easy and Clear Pipeline With LLM-Automation to Preprocess Medical Image for Everybody

A vision-language foundation model for computational pathology - Nature Medicine

Facilitates simple large scale processing of HLS Medical images, documents, zip files. Previously at https://github.com/dmoore247/pixels

ACC-UNet is A Completely Convolutional UNet model inspired from transformer-based UNets

A curated list of foundation models for vision and language tasks in medical imaging

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

Auto-differentiable digitally reconstructed radiographs in PyTorch

Easy and Clear Pipeline With LLM-Automation to Preprocess Medical Image for Everybody

Facilitates simple large scale processing of HLS Medical images, documents, zip files. Previously at https://github.com/dmoore247/pixels

Pytorch pipeline for 3D image domain translation using Cycle-Generative-Adversarial-networks, without paired examples.

ACC-UNet is A Completely Convolutional UNet model inspired from transformer-based UNets

A vision-language foundation model for computational pathology - Nature Medicine

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.

cuCIM - RAPIDS GPU-accelerated image processing library

Brainchop: In-browser 3D MRI rendering and segmentation

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

A curated list of foundation models for vision and language tasks in medical imaging

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

A collection of resources on applications of multi-modal learning in medical imaging.

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

Medical Image Segmentation with Diffusion Model

医学影像数据集列表 『An Index for Medical Imaging Datasets』

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.

Efficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans

Auto-differentiable digitally reconstructed radiographs in PyTorch

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

医学影像数据集列表 『An Index for Medical Imaging Datasets』

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

Easy and Clear Pipeline With LLM-Automation to Preprocess Medical Image for Everybody

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

Medical Image Segmentation with Diffusion Model

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

A list of Medical imaging datasets.

[IEEE TMI] Official Implementation for UNet++

Weasis is a DICOM viewer available as a desktop application or as a web-based application.

[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

A collection of resources on applications of multi-modal learning in medical imaging.

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

A curated list of awesome DICOM resources and libraries.

A large-scale dataset of both raw MRI measurements and clinical MRI images.

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

A vision-language foundation model for computational pathology - Nature Medicine

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

"Structure-Aware Sparse-View X-ray 3D Reconstruction" (CVPR 2024)

Easy and Clear Pipeline With LLM-Automation to Preprocess Medical Image for Everybody

Facilitates simple large scale processing of HLS Medical images, documents, zip files. Previously at https://github.com/dmoore247/pixels

A curated list of awesome DICOM resources and libraries.

Resurces for MRI images processing and deep learning in 3D

[Nature Machine Intelligence 2024] Code and evaluation repository for the paper

DockerCompose File for OHIF with Orthanc

Code for the paper "SelfReg-UNet: Self-Regularized UNet for Medical Image Segmentation "

ACC-UNet is A Completely Convolutional UNet model inspired from transformer-based UNets

nuclei.io: Human-in-the-loop active learning framework for pathology image analysis

Main repository for the CCP SynerBI software

Multimodal Brain mpMRI segmentation on BraTS 2023 and BraTS 2021 datasets.

[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.

A vision-language foundation model for computational pathology - Nature Medicine

Pytorch pipeline for 3D image domain translation using Cycle-Generative-Adversarial-networks, without paired examples.

[ECCV 2024] ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Medical Image

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

Develop dose prediction models for knowledge-based planning in radiotherapy

Medical image viewer using DWV (DICOM Web Viewer) and Vue.js.

This repository is included artificial intelligence, machine learning, data science, computer vision projects related to healthcare.

Auto-differentiable digitally reconstructed radiographs in PyTorch

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

医学影像数据集列表 『An Index for Medical Imaging Datasets』

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

A collection of resources on applications of multi-modal learning in medical imaging.

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

A list of Medical imaging datasets.

[IEEE TMI] Official Implementation for UNet++

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

Medical Image Segmentation with Diffusion Model

Cornerstone is a set of JavaScript libraries that can be used to build web-based medical imaging applications. It provides a framework to build radiology applications such as the OHIF Viewer.

Multi-platform, free open source software for visualization and image computing.

Adapting Segment Anything Model for Medical Image Segmentation

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimens...

MONAI Label is an intelligent open source image labeling and learning tool.

A curated list of awesome DICOM resources and libraries.

Weasis is a DICOM viewer available as a desktop application or as a web-based application.

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

A curated list of foundation models for vision and language tasks in medical imaging

TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.

Easy and Clear Pipeline With LLM-Automation to Preprocess Medical Image for Everybody

[MICCAI'2024, Oral] Official implementation of BrLP method from "Enhancing Spatiotemporal Disease Progression Models via Latent Diffusion and Prior Knowledge"

RET-CLIP: A Retinal Image Foundation Model Pre-trained with Clinical Diagnostic Reports

LHU-Net: A Light Hybrid U-Net for Cost-efficient, High-performance Volumetric Medical Image Segmentation

Code for the paper "SelfReg-UNet: Self-Regularized UNet for Medical Image Segmentation "

Facilitates simple large scale processing of HLS Medical images, documents, zip files. Previously at https://github.com/dmoore247/pixels

Multimodal Brain mpMRI segmentation on BraTS 2023 and BraTS 2021 datasets.

A curated list of awesome DICOM resources and libraries.

Medical image viewer using DWV (DICOM Web Viewer) and React.

✨基于 3D 卷积神经网络(CNN)的阿尔兹海默智能诊断 Web 应用 Alzheimer's Intelligent Diagnosis Web Application based on 3D Convolutional Neural Network and the ADNI Dataset ✨ 🚩(with README in English) 📌含在线demo：医学影像识别系统，图像识...

nuclei.io: Human-in-the-loop active learning framework for pathology image analysis

A Python tool to evaluate the performance of VLM on the medical domain.

Develop dose prediction models for knowledge-based planning in radiotherapy

a collection of computer vision projects&tools. 计算机视觉方向项目和工具集合。

A collection of resources on applications of multi-modal learning in medical imaging.

MedViT: A Robust Vision Transformer for Generalized Medical Image Classification (Computers in Biology and Medicine 2023)

DockerCompose File for OHIF with Orthanc

Clinically-Interpretable Radiomics [MICCAI'22, CMPB'21]

A curated list of foundation models for vision and language tasks in medical imaging

:hospital: 医学图像作业：图像配准论文阅读；眼底血管分割实验

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

A vision-language foundation model for computational pathology - Nature Medicine

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

Computation-Efficient Era: A Comprehensive Survey of State Space Models in Medical Image Analysis

This is an official repo for fine-tuning SAM to customized medical images.

Replacing Mamba with xLSTM! It works better. We show that xLSTM-Unet can be an effective semantic segmentation backbone.

SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI

[MICCAI'2024, Oral] Official implementation of BrLP method from "Enhancing Spatiotemporal Disease Progression Models via Latent Diffusion and Prior Knowledge"

Code for the paper "SelfReg-UNet: Self-Regularized UNet for Medical Image Segmentation "

A Hybrid CNN-Transformer Architecture for Precise Medical Image Segmentation

Official implementation of "Exploiting Scale-Variant Attention for Segmenting Small Medical Objects"

Official PyTorch implementation of SelfRDB, a diffusion bridge model for multi-modal medical image synthesis

LHU-Net: A Light Hybrid U-Net for Cost-efficient, High-performance Volumetric Medical Image Segmentation

RET-CLIP: A Retinal Image Foundation Model Pre-trained with Clinical Diagnostic Reports

Developed the ViViT model for medical video classification, enhancing 3D organ image analysis using transformer-based architectures.

Easy and Clear Pipeline With LLM-Automation to Preprocess Medical Image for Everybody

[IEEE TMI-2024] SASAN: Spectrum-Axial Spatial Approach Networks for Medical Image Segmentation

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

医学影像数据集列表 『An Index for Medical Imaging Datasets』

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

"Structure-Aware Sparse-View X-ray 3D Reconstruction" (CVPR 2024)

Multi-platform, free open source software for visualization and image computing.

A collection of resources on applications of multi-modal learning in medical imaging.

A list of Medical imaging datasets.

Adapting Segment Anything Model for Medical Image Segmentation

Medical Image Segmentation with Diffusion Model

A vision-language foundation model for computational pathology - Nature Medicine

[IEEE TMI] Official Implementation for UNet++

Cornerstone is a set of JavaScript libraries that can be used to build web-based medical imaging applications. It provides a framework to build radiology applications such as the OHIF Viewer.

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

MICCAI 2019-2023 Open Source Papers

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

"Structure-Aware Sparse-View X-ray 3D Reconstruction" (CVPR 2024)

A vision-language foundation model for computational pathology - Nature Medicine

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

Replacing Mamba with xLSTM! It works better. We show that xLSTM-Unet can be an effective semantic segmentation backbone.

SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI

[CVPR 2024] Intraoperative 2D/3D registration via differentiable X-ray rendering

[ECCV 2024] ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Medical Image

comprehensive library of 3D transmission Computed Tomography (CT) algorithms with Python and C++ APIs, a PyQt GUI, and fully integrated with PyTorch

Transparent medical image AI via an image–text foundation model grounded in medical literature

A curated list of foundation models for vision and language tasks in medical imaging

[Nature Machine Intelligence 2024] Code and evaluation repository for the paper

✨基于 3D 卷积神经网络(CNN)的阿尔兹海默智能诊断 Web 应用 Alzheimer's Intelligent Diagnosis Web Application based on 3D Convolutional Neural Network and the ADNI Dataset ✨ 🚩(with README in English) 📌含在线demo：医学影像识别系统，图像识...

A curated list of awesome DICOM resources and libraries.

Multimodal Brain mpMRI segmentation on BraTS 2023 and BraTS 2021 datasets.

Federated learning with homomorphic encryption enables multiple parties to securely co-train artificial intelligence models in pathology and radiology, reaching state-of-the-art performance with priva...

MedViT: A Robust Vision Transformer for Generalized Medical Image Classification (Computers in Biology and Medicine 2023)

Repository for the Universal Lesion Segmentation Challenge '23

[MedIA] Paper list and source code for survey "A comprehensive survey on deep active learning in medical image analysis"