Trending repositories for topic medical-imaging

医学影像数据集列表 『An Index for Medical Imaging Datasets』

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

Adapting Segment Anything Model for Medical Image Segmentation

Medical Image Segmentation with Diffusion Model

A large-scale dataset of both raw MRI measurements and clinical MRI images.

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

A collection of resources on applications of multi-modal learning in medical imaging.

Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening

A collection of resources on applications of Transformers in Medical Imaging.

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimens...

[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.

The implementation of the technical report: "Customized Segment Anything Model for Medical Image Segmentation"

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

Medical image captioning using OpenAI's CLIP

This project uses YOLOv8 to perform tasks like classification, detection, and segmentation in medical images through a user-friendly interface.

Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and SimpleITK Images

Classify Skin cancer from the skin lesion images using Image classification. The dataset for the project is obtained from the Kaggle SIIM-ISIC-Melanoma-Classification competition.

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

Medical image captioning using OpenAI's CLIP

This project uses YOLOv8 to perform tasks like classification, detection, and segmentation in medical images through a user-friendly interface.

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and SimpleITK Images

Classify Skin cancer from the skin lesion images using Image classification. The dataset for the project is obtained from the Kaggle SIIM-ISIC-Melanoma-Classification competition.

This is an official repo for fine-tuning SAM to customized medical images.

医学影像数据集列表 『An Index for Medical Imaging Datasets』

[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.

A collection of resources on applications of multi-modal learning in medical imaging.

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

Adapting Segment Anything Model for Medical Image Segmentation

A Numerical Magnetic Resonance Imaging (MRI) Simulation Platform

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

The implementation of the technical report: "Customized Segment Anything Model for Medical Image Segmentation"

Medical Image Segmentation with Diffusion Model

Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening

A large-scale dataset of both raw MRI measurements and clinical MRI images.

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

Cornerstone is a set of JavaScript libraries that can be used to build web-based medical imaging applications. It provides a framework to build radiology applications such as the OHIF Viewer.

医学影像数据集列表 『An Index for Medical Imaging Datasets』

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

Adapting Segment Anything Model for Medical Image Segmentation

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

Medical Image Segmentation with Diffusion Model

A large-scale dataset of both raw MRI measurements and clinical MRI images.

A collection of resources on applications of Transformers in Medical Imaging.

[IEEE TMI] Official Implementation for UNet++

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

MONAI Generative Models makes it easy to train, evaluate, and deploy generative models and related applications

A collection of resources on applications of multi-modal learning in medical imaging.

Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics

Multimodal Brain mpMRI segmentation on BraTS 2023 and BraTS 2021 datasets.

A Python tool to evaluate the performance of VLM on the medical domain.

Offical Pytorch Code for "Microscopic-Mamba: Revealing the Secrets of Microscopic Images with Just 4M Parameters"

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

Medical image captioning using OpenAI's CLIP

:hugs: AeroPath: An airway segmentation benchmark dataset with challenging pathology

This project uses YOLOv8 to perform tasks like classification, detection, and segmentation in medical images through a user-friendly interface.

Awesome CT Reconstruction

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

Official implementation of "Exploiting Scale-Variant Attention for Segmenting Small Medical Objects"

[MedIA'24] FLAIR: A Foundation LAnguage-Image model of the Retina for fundus image understanding.

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

A multi-contrast multi-repetition multi-channel MRI k-space dataset for low-field MRI research

[MICCAI'21 & TMI'23] RibSeg Dataset and Point Cloud Baselines for Rib Segmentation from CT Scans

comprehensive library of 3D transmission Computed Tomography (CT) algorithms with Python and C++ APIs, a PyQt GUI, and fully integrated with PyTorch

Replacing Mamba with xLSTM! It works better. We show that xLSTM-Unet can be an effective semantic segmentation backbone.

Official PyTorch implementation of SynDiff described in the paper (https://arxiv.org/abs/2207.08208).

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and SimpleITK Images

A collection of resources on applications of multi-modal learning in medical imaging.

医学影像数据集列表 『An Index for Medical Imaging Datasets』

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

Multi-platform, free open source software for visualization and image computing.

A collection of resources on applications of multi-modal learning in medical imaging.

Adapting Segment Anything Model for Medical Image Segmentation

Medical Image Segmentation with Diffusion Model

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

A large-scale dataset of both raw MRI measurements and clinical MRI images.

A vision-language foundation model for computational pathology - Nature Medicine

[IEEE TMI] Official Implementation for UNet++

"Structure-Aware Sparse-View X-ray 3D Reconstruction" (CVPR 2024)

A list of Medical imaging datasets.

TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

DICOM Web Viewer: open source zero footprint medical image library.

a collection of computer vision projects&tools. 计算机视觉方向项目和工具集合。

[MICCAI'2024, Oral] Official implementation of BrLP method from "Enhancing Spatiotemporal Disease Progression Models via Latent Diffusion and Prior Knowledge"

:hugs: AeroPath: An airway segmentation benchmark dataset with challenging pathology

Multimodal Brain mpMRI segmentation on BraTS 2023 and BraTS 2021 datasets.

A curated list of awesome DICOM resources and libraries.

Code for the paper "SelfReg-UNet: Self-Regularized UNet for Medical Image Segmentation "

✨基于 3D 卷积神经网络(CNN)的阿尔兹海默智能诊断 Web 应用 Alzheimer's Intelligent Diagnosis Web Application based on 3D Convolutional Neural Network and the ADNI Dataset ✨ 🚩(with README in English) 📌含在线demo：医学影像识别系统，图像识...

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

[MICCAI 2022] The official repository of Light-weight spatio-temporal graphs for segmentation and ejection fraction prediction in cardiac ultrasound. Project page: https://guybenyosef.githu...

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

[MedIA'24] FLAIR: A Foundation LAnguage-Image model of the Retina for fundus image understanding.

comprehensive library of 3D transmission Computed Tomography (CT) algorithms with Python and C++ APIs, a PyQt GUI, and fully integrated with PyTorch

A vision-language foundation model for computational pathology - Nature Medicine

This is an official repo for fine-tuning SAM to customized medical images.

a collection of computer vision projects&tools. 计算机视觉方向项目和工具集合。

Medical image captioning using OpenAI's CLIP

The impact of Artificial Intelligence in improving healthcare facilities is increasing significantly. This repository provides implementation of different Deep Learning and Machine Learning techniques...

[ECCV 2024] ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Medical Image

Official implementation of "Exploiting Scale-Variant Attention for Segmenting Small Medical Objects"

(BIBM22) This is the official code repository for "MALUNet: A Muti-Attention and Light-weight UNet for Skin Lesion Segmentation".

A Python tool to evaluate the performance of VLM on the medical domain.

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

A vision-language foundation model for computational pathology - Nature Medicine

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

Computation-Efficient Era: A Comprehensive Survey of State Space Models in Medical Image Analysis

[ECCV 2024] ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Medical Image

This is an official repo for fine-tuning SAM to customized medical images.

Replacing Mamba with xLSTM! It works better. We show that xLSTM-Unet can be an effective semantic segmentation backbone.

[CVPR 2024] Intraoperative 2D/3D registration via differentiable X-ray rendering

SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI

A Hybrid CNN-Transformer Architecture for Precise Medical Image Segmentation

Official implementation of "Exploiting Scale-Variant Attention for Segmenting Small Medical Objects"

[MICCAI'2024, Oral] Official implementation of BrLP method from "Enhancing Spatiotemporal Disease Progression Models via Latent Diffusion and Prior Knowledge"

Code for the paper "SelfReg-UNet: Self-Regularized UNet for Medical Image Segmentation "

Official Pytorch Code base for "MobileUtr: Revisiting the relationship between light-weight CNN and Transformer for efficient medical image segmentation"

Official PyTorch implementation of SelfRDB, a diffusion bridge model for multi-modal medical image synthesis

Offical Pytorch Code for "Microscopic-Mamba: Revealing the Secrets of Microscopic Images with Just 4M Parameters"

Developed the ViViT model for medical video classification, enhancing 3D organ image analysis using transformer-based architectures.

[IEEE TMI-2024] SASAN: Spectrum-Axial Spatial Approach Networks for Medical Image Segmentation

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

医学影像数据集列表 『An Index for Medical Imaging Datasets』

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

Medical SAM 2: Segment Medical Images As Video Via Segment Anything Model 2

Multi-platform, free open source software for visualization and image computing.

"Structure-Aware Sparse-View X-ray 3D Reconstruction" (CVPR 2024)

Adapting Segment Anything Model for Medical Image Segmentation

A collection of resources on applications of multi-modal learning in medical imaging.

A list of Medical imaging datasets.

Medical Image Segmentation with Diffusion Model

[IEEE TMI] Official Implementation for UNet++

A vision-language foundation model for computational pathology - Nature Medicine

MICCAI 2019-2023 Open Source Papers

Cornerstone is a set of JavaScript libraries that can be used to build web-based medical imaging applications. It provides a framework to build radiology applications such as the OHIF Viewer.

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓，同时包含工作和科研过程中的新想法、新问题、新资源与新项目

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

"Radiative Gaussian Splatting for Efficient X-ray Novel View Synthesis" (ECCV 2024)

A vision-language foundation model for computational pathology - Nature Medicine

Replacing Mamba with xLSTM! It works better. We show that xLSTM-Unet can be an effective semantic segmentation backbone.

SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI

A curated list of foundation models for vision and language tasks in medical imaging

comprehensive library of 3D transmission Computed Tomography (CT) algorithms with Python and C++ APIs, a PyQt GUI, and fully integrated with PyTorch

Transparent medical image AI via an image–text foundation model grounded in medical literature

Repository for the Universal Lesion Segmentation Challenge '23

[Nature Machine Intelligene 2024] Code and evaluation repository for the paper

✨基于 3D 卷积神经网络(CNN)的阿尔兹海默智能诊断 Web 应用 Alzheimer's Intelligent Diagnosis Web Application based on 3D Convolutional Neural Network and the ADNI Dataset ✨ 🚩(with README in English) 📌含在线demo：医学影像识别系统，图像识...

A curated list of awesome DICOM resources and libraries.

[MedIA] Paper list and source code for survey "A comprehensive survey on deep active learning in medical image analysis"

Multimodal Brain mpMRI segmentation on BraTS 2023 and BraTS 2021 datasets.

MedViT: A Robust Vision Transformer for Generalized Medical Image Classification (Computers in Biology and Medicine 2023)

A collection of resources on applications of multi-modal learning in medical imaging.

[ICCV 2023] A curated list of resources on implicit neural representations in Medical Imaging

Awesome CT Reconstruction

This project uses YOLOv8 to perform tasks like classification, detection, and segmentation in medical images through a user-friendly interface.