Trending repositories for topic synthetic-biology

Open source biolab

Open source biolab

Open source biolab

Open source biolab

Open source biolab

:eye: Python library to plot DNA sequence features (e.g. from Genbank files)

CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.

A Go package for designing DNA.

:alembic: Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies

a JavaScript DNA, RNA, and protein sequence viewer

Open source biolab

A Go package for designing DNA.

CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.

:alembic: Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies

:eye: Python library to plot DNA sequence features (e.g. from Genbank files)

a JavaScript DNA, RNA, and protein sequence viewer

CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.

CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.

:eye: Python library to plot DNA sequence features (e.g. from Genbank files)

Open source biolab

A Go package for engineering organisms.

a JavaScript DNA, RNA, and protein sequence viewer

:pencil2: A versatile DNA sequence optimizer

A Go package for designing DNA.

BGC Detection and Classification Using Deep Learning

Genetic circuit design automation

teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, design libraries, and track samples. Open-source Python platfor...

For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.

Reinforcement Learning based bioretrosynthesis tool

Official and maintained implementation of the paper "Attention-Based Transformers for Instance Segmentation of Cells in Microstructures" [BIBM 2020].

:alembic: Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies

Cello v2 is the continuation of the Cello genetic circuit design software.

Web application enabling users and software to browse, upload, and share synthetic biology designs

The resources I always recommend to new synthetic biologists.

Interpretable genotype-phenotype landscape modeling

A Go package for designing DNA.

Open source biolab

teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, design libraries, and track samples. Open-source Python platfor...

a JavaScript DNA, RNA, and protein sequence viewer

BGC Detection and Classification Using Deep Learning

:eye: Python library to plot DNA sequence features (e.g. from Genbank files)

Reinforcement Learning based bioretrosynthesis tool

:pencil2: A versatile DNA sequence optimizer

For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.

:alembic: Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies

Cello v2 is the continuation of the Cello genetic circuit design software.

A Go package for engineering organisms.

Interpretable genotype-phenotype landscape modeling

Web application enabling users and software to browse, upload, and share synthetic biology designs

Official and maintained implementation of the paper "Attention-Based Transformers for Instance Segmentation of Cells in Microstructures" [BIBM 2020].

The resources I always recommend to new synthetic biologists.

Genetic circuit design automation