BAMeScience / fiora

Fiora is an in silico fragmentation algorithm for small compounds that produces simulated tandem mass spectra (MS/MS). The framework employs a graph neural network to predict bond cleavages and fragment ion intensities via edge prediction. Additionally, Fiora can estimate retention times (RT) and collision cross sections (CCS) of the compounds.

Date Created 2023-10-11 (about a year ago)
Commits 179 (last one 3 months ago)
Stargazers 26 (0 this week)
Watchers 2 (0 this week)
Forks 3
License mit
Ranking

RepositoryStats indexes 616,225 repositories, of these BAMeScience/fiora is ranked #604,304 (2nd percentile) for total stargazers, and #493,236 for total watchers. Github reports the primary language for this repository as Jupyter Notebook, for repositories using this language it is ranked #17,841/18,359.

BAMeScience/fiora is also tagged with popular topics, for these it's ranked: bioinformatics (#827/833)

Other Information

There have been 2 releases, the latest one was published on 2025-01-15 (about a month ago) with the name v0.1.1.

Star History

Github stargazers over time

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Watcher History

Github watchers over time, collection started in '23

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Recent Commit History

179 commits on the default branch (main) since jan '22

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Issue History

Total Issues
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Closed Issues
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Languages

The primary language is Jupyter Notebook but there's also others...

Jupyter NotebookJupyter NotebookPythonPython

updated: 2025-02-08 @ 12:43am, id: 703666689 / R_kgDOKfEaAQ