Statistics for topic bioinformatics
RepositoryStats tracks 518,325 Github repositories, of these 711 are tagged with the bioinformatics topic. The most common primary language for repositories using this topic is Python (259). Other languages include: C++ (70), C (52), R (51), Jupyter Notebook (41), Rust (26), JavaScript (25), Java (18), Shell (15), HTML (15)
Stargazers over time for topic bioinformatics
Most starred repositories for topic bioinformatics (view more)
Trending repositories for topic bioinformatics (view more)
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
Official git repository for Biopython (originally converted from CVS)
RawHash is the first mechanism that can accurately and efficiently map raw nanopore signals to large reference genomes (e.g., a human reference genome) in real-time without using powerful computation...
A minimal genetic data explorer that processes all genetic information locally.
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
multiPrime is a mismatch-tolerant minimal primer set design tool for large and diverse sequences (e.g. Virus). Here is a web-based version (test: http://multiPrime.cn))
Foldseek enables fast and sensitive comparisons of large structure sets.
RawHash is the first mechanism that can accurately and efficiently map raw nanopore signals to large reference genomes (e.g., a human reference genome) in real-time without using powerful computation...
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
Command line utility for manipulating Illumina-generated FASTQ files.
Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
A curated list of awesome Bioinformatics libraries and software.
Unix, R and python tools for genomics and data science
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
RawHash is the first mechanism that can accurately and efficiently map raw nanopore signals to large reference genomes (e.g., a human reference genome) in real-time without using powerful computation...
Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis
multiPrime is a mismatch-tolerant minimal primer set design tool for large and diverse sequences (e.g. Virus). Here is a web-based version (test: http://multiPrime.cn))
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal sequencing data.
Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through Multi-Modal Learning: A Survey"
Official git repository for Biopython (originally converted from CVS)
A curated list of awesome Bioinformatics libraries and software.
A python library for multi omics included bulk and single cell RNA-seq analysis.
Cell2Sentence turns scRNA-seq data into text for LLM training.
multiPrime is a mismatch-tolerant minimal primer set design tool for large and diverse sequences (e.g. Virus). Here is a web-based version (test: http://multiPrime.cn))