Statistics for topic bioinformatics
RepositoryStats tracks 584,797 Github repositories, of these 789 are tagged with the bioinformatics topic. The most common primary language for repositories using this topic is Python (289). Other languages include: C++ (77), C (54), R (51), Jupyter Notebook (47), Rust (31), JavaScript (26), Java (22), Shell (19), HTML (18)
Stargazers over time for topic bioinformatics
Most starred repositories for topic bioinformatics (view more)
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Foldseek enables fast and sensitive comparisons of large structure sets.
Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through Multi-Modal Learning: A Survey"
MrBiomics - Modules & Recipes augment Bioinformatics for Multi-Omics Analyses at Scale
Multiple Protein Structure Alignment at Scale with FoldMason
Ultimate ATAC-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.
A curated list of awesome Bioinformatics libraries and software.
MrBiomics - Modules & Recipes augment Bioinformatics for Multi-Omics Analyses at Scale
Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.
Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through Multi-Modal Learning: A Survey"
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
Official git repository for Biopython (originally converted from CVS)
What should perfect bioinformatic tools be like?
Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)