Statistics for topic computational-biology

List of Computer Science courses with video lectures.

CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.

Official repository for the ProteinGym benchmarks

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

COBRApy is a package for constraint-based modeling of metabolic networks.

CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.

Official repository for the ProteinGym benchmarks

COBRApy is a package for constraint-based modeling of metabolic networks.

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

SimTK OpenSim C++ libraries and command-line applications, and Java/Python wrapping.

List of Computer Science courses with video lectures.

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.

Working with molecular structures in pandas DataFrames

A comprehensive library for computational molecular biology

CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.

Learning the language of protein-protein interactions

Package for processing and analyzing glycans and their role in biology.

Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

Official repository for the ProteinGym benchmarks

List of Computer Science courses with video lectures.

Learning the language of protein-protein interactions

A comprehensive library for computational molecular biology

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

SimTK OpenSim C++ libraries and command-line applications, and Java/Python wrapping.

Learning the language of protein-protein interactions

CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.

Code for our Nature Scientific Reports paper "A universal framework for accurate and efficient geometric deep learning of molecular systems"

Package for processing and analyzing glycans and their role in biology.

A comprehensive library for computational molecular biology

CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.

Learning the language of protein-protein interactions

Protein structure alignment and search algorithm

Top open source software from the top 50 pharmaceutical companies

List of Computer Science courses with video lectures.

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

A comprehensive library for computational molecular biology

Official repository for the ProteinGym benchmarks

A list of schools and researchers in computational neuroscience

Mixed continous/categorical flow-matching model for de novo molecule generation.

Open-source usearch

No description

A curated list of awesome computational cryo-ET methods.

Protein language model trained on coding DNA