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Protein Graph Library
Created
2019-08-28
807 commits to master branch, last one 28 days ago
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
Created
2022-04-25
1,739 commits to main branch, last one 10 days ago
A comprehensive library for computational molecular biology
Created
2017-07-30
4,708 commits to main branch, last one 3 days ago
A dependency-free cross-platform swiss army knife for PDB files.
Created
2014-11-27
478 commits to master branch, last one 11 months ago
An all-atom protein structure dataset for machine learning.
Created
2020-03-12
522 commits to master branch, last one 8 months ago
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
dna
docking
protein
peptides
chemistry
proteomics
bioinformatics
protein-design
protein-docking
molecular-biology
protein-structure
structural-biology
swarm-intelligence
bioinformatics-tool
molecular-structures
artificial-intelligence
protein-dna-interactions
structural-bioinformatics
glowworm-swarm-optimization
protein-protein-interaction
Created
2019-09-27
488 commits to master branch, last one 10 months ago
macromolecular crystallography library and utilities
Created
2017-02-02
4,286 commits to master branch, last one a day ago
Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation
Created
2022-11-29
15 commits to main branch, last one about a year ago
C-library for calculating Solvent Accessible Surface Areas
Created
2013-06-18
1,295 commits to master branch, last one 5 months ago
Python macromolecular parsing (with .pdb/.cif/.mmtf parsing and production)
Created
2016-05-04
1,301 commits to master branch, last one 2 years ago
A curated list of awesome computational cryo-EM methods.
Created
2020-06-23
133 commits to master branch, last one 28 days ago
VSCode Extension for interactively visualising protein structure data in the editor
Created
2021-11-19
30 commits to main branch, last one 2 years ago
A Julia package to read, write and manipulate macromolecular structures
Created
2017-08-16
307 commits to master branch, last one 3 days ago
PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.
Created
2020-05-22
965 commits to master branch, last one 3 months ago
The Integrative Modeling Platform
Created
2012-06-21
24,887 commits to develop branch, last one 11 hours ago
PyMOL extension to color AlphaFold structures by confidence (pLDDT).
Created
2021-11-16
7 commits to master branch, last one 2 years ago
The Biochemical Algorithms Library
Created
2015-02-19
13,967 commits to master branch, last one 2 years ago
RiboNucleic Acid (RNA) Language Model
Created
2024-02-28
35 commits to main branch, last one 10 days ago
The MPI Bioinformatics Toolkit
Created
2016-07-01
7,656 commits to develop branch, last one 2 months ago
Control PyMOL sessions via IPython
Created
2013-11-20
71 commits to master branch, last one 2 years ago
Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.
Created
2020-04-08
406 commits to master branch, last one 3 years ago
This repository includes the slides and the practicals for the course of Structural Bioinformatics of the MBB/QB degrees at the University of Milano, originally inspired by https://github.com/pb3lab/i...
Created
2021-10-11
368 commits to main branch, last one 5 days ago
An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.
Created
2022-01-21
3,499 commits to main branch, last one 2 months ago
A curated list of awesome computational cryo-ET methods.
Created
2023-01-14
31 commits to main branch, last one about a month ago
Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (convolutional neural networks).
Created
2022-01-07
231 commits to main branch, last one 9 months ago