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Protein Graph Library
Created
2019-08-28
808 commits to master branch, last one about a month ago
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
Created
2022-04-25
1,822 commits to main branch, last one 6 days ago
A comprehensive library for computational molecular biology
Created
2017-07-30
4,883 commits to main branch, last one 16 days ago
A dependency-free cross-platform swiss army knife for PDB files.
Created
2014-11-27
478 commits to master branch, last one about a year ago
An all-atom protein structure dataset for machine learning.
Created
2020-03-12
522 commits to master branch, last one about a year ago
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
dna
docking
protein
peptides
chemistry
proteomics
bioinformatics
protein-design
protein-docking
molecular-biology
protein-structure
structural-biology
swarm-intelligence
bioinformatics-tool
molecular-structures
artificial-intelligence
protein-dna-interactions
structural-bioinformatics
glowworm-swarm-optimization
protein-protein-interaction
Created
2019-09-27
488 commits to master branch, last one about a year ago
macromolecular crystallography library and utilities
Created
2017-02-02
4,471 commits to master branch, last one 2 days ago
PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.
Created
2020-05-22
1,002 commits to master branch, last one about a month ago
C-library for calculating Solvent Accessible Surface Areas
Created
2013-06-18
1,295 commits to master branch, last one 10 months ago
Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation
Created
2022-11-29
15 commits to main branch, last one 2 years ago
A curated list of awesome computational cryo-EM methods.
Created
2020-06-23
137 commits to master branch, last one 29 days ago
Python macromolecular parsing (with .pdb/.cif/.mmtf parsing and production)
Created
2016-05-04
1,301 commits to master branch, last one 2 years ago
VSCode Extension for interactively visualising protein structure data in the editor
Created
2021-11-19
32 commits to main branch, last one 4 months ago
A Julia package to read, write and manipulate macromolecular structures
Created
2017-08-16
315 commits to master branch, last one 11 days ago
RiboNucleic Acid (RNA) Language Model
Created
2024-02-28
41 commits to main branch, last one 7 days ago
PyMOL extension to color AlphaFold structures by confidence (pLDDT).
Created
2021-11-16
7 commits to master branch, last one 3 years ago
The Integrative Modeling Platform
Created
2012-06-21
24,977 commits to develop branch, last one 10 days ago
The Biochemical Algorithms Library
Created
2015-02-19
13,967 commits to master branch, last one 2 years ago
The MPI Bioinformatics Toolkit
Created
2016-07-01
7,657 commits to develop branch, last one 2 months ago
This repository includes the slides and the practicals for the course of Structural Bioinformatics of the MBB/QB degrees at the University of Milano, originally inspired by https://github.com/pb3lab/i...
Created
2021-10-11
378 commits to main branch, last one 3 months ago
Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.
Created
2020-04-08
406 commits to master branch, last one 4 years ago
Control PyMOL sessions via IPython
Created
2013-11-20
71 commits to master branch, last one 2 years ago
FreeSASA Python Module
Created
2018-02-03
118 commits to master branch, last one about a year ago
Set of useful HADDOCK utility scripts
Created
2015-09-15
108 commits to master branch, last one 7 months ago
A curated list of awesome computational cryo-ET methods.
Created
2023-01-14
31 commits to main branch, last one 5 months ago
An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.
Created
2022-01-21
3,499 commits to main branch, last one 6 months ago
Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (convolutional neural networks).
Created
2022-01-07
231 commits to main branch, last one about a year ago
This repo is dedicated to make bioinformatics resources available for anyone who wish to enter this field. (You may find it useful or not useful based on your level). I am still embarking my path in t...
Created
2023-11-27
19 commits to main branch, last one about a year ago