Search Results - RepositoryStats

225

1.0k

other

24

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

ddi dti ppi biocomputing deeplearning graph-networks protein-design molecule-design protein-docking protein-folding machine-learning representation-learning rna-structure-prediction self-supervised-learning protein-structure-prediction

Created 2020-11-21

864 commits to dev branch, last one 7 days ago

PyRosetta.notebooks RosettaCommons

151

492

mit

329

Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design

dna rosetta pyrosetta google-colab protein-design protein-docking protein-folding jupyter-notebook rna-structure-prediction protein-structure-prediction

Created 2019-05-24

595 commits to master branch, last one 3 months ago

seqfold Lattice-Automation

12

84

mit

7

nucleic acid folding

dna rna folding dna-folding rna-folding structure-prediction dna-structure-prediction rna-structure-prediction

Created 2019-11-25

104 commits to main branch, last one 3 months ago

RiNALMo lbcb-sci

10

72

apache-2.0

4

RiboNucleic Acid (RNA) Language Model

rna biology rna-seq bioinformatics language-model foundation-model structural-biology secondary-structure splice-site-prediction rna-secondary-structure rna-structure-prediction

Created 2024-02-28

35 commits to main branch, last one 12 days ago

Physics-aware-Multiplex-GNN XieResearchGroup

11

53

unknown

2

Code for our Nature Scientific Reports paper "A universal framework for accurate and efficient geometric deep learning of molecular systems"

docking machine-learning computational-biology graph-neural-networks computational-chemistry geometric-deep-learning rna-structure-prediction protein-ligand-interactions

Created 2023-05-23

25 commits to main branch, last one 22 days ago

RNA-MSM yikunpku

4

50

mit

2

Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding and attention map to match different types of downstream tasks.

rna bioinformatics language-model rna-structure-prediction

Created 2023-01-05

37 commits to master branch, last one 4 months ago