Search Results - RepositoryStats

abricate tseemann

87

349

gpl-2.0

29

:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes

contigs genomic-regions virulence-genes bioinformatics-tool antimicrobial-resistance-genes

Created 2014-07-17

244 commits to master branch, last one 4 years ago

lightdock lightdock

36

287

gpl-3.0

12

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

Created 2019-09-27

488 commits to master branch, last one 5 months ago

Scissor sunduanchen

29

167

gpl-3.0

3

Scissor package

data-mining bioinformatics-tool single-cell-analysis

Created 2020-04-11

79 commits to master branch, last one 2 years ago

trimal inab

39

156

gpl-3.0

12

A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0

trimming bioinformatics-tool multiple-sequence-alignment

Created 2009-09-20

287 commits to trimAl branch, last one 4 months ago

RNAlysis GuyTeichman

13

123

mit

3

Analyze your RNA sequencing data without writing a single line of code

rnaseq rna-seq smallrna smallrna-seq bioinformatics gui-application transcriptomics rna-seq-analysis rna-seq-pipeline bioinformatics-tool bioinformatics-analysis bioinformatics-pipeline

Created 2019-06-20

3,227 commits to master branch, last one 2 days ago

YouTube-Tutorials avrabyt

48

110

mit

7

📹 Collection of my Youtube Tutorials over the years! Read, write, and share what you create ✨🎈

openai python chatgpt3 langchain streamlit openai-api openai-gpt3 google-sheet python-webapp machinelearning python-beginners streamlit-web-app google-spreadsheet python-programming bioinformatics-tool streamlit-components bioinformatics-python streamlit-application machinelearning-python

Created 2021-12-31

420 commits to main branch, last one 2 days ago

open-cravat KarchinLab

27

110

mit

21

A modular annotation tool for genomic variants

python python3 genomics javascript bioinformatics annotation-tool variant-analysis variant-annotation bioinformatics-tool variant-annotations genomic-data-analysis bioinformatics-pipeline

Created 2018-07-03

2,697 commits to master branch, last one 10 days ago

seqfu2 telatin

7

102

gpl-3.0

3

:rocket: seqfu - Sequece Fastx Utilities

ngs fasta fastq bioconda genomics sequencing bioinformatics bioinformatics-tool

Created 2020-11-26

584 commits to main branch, last one 23 days ago

iLearnPlus Superzchen

32

88

unknown

6

iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of automated machine-learning pipelines for computational analysis and...

python prediction deep-learning machine-learning feature-selection sequence-analysis automated-modelling bioinformatics-tool biomedical-data-analytics

Created 2020-10-22

86 commits to main branch, last one 2 months ago

RNA-Bloom bcgsc

7

85

other

11

:hibiscus: reference-free transcriptome assembly for short and long reads

rna-seq bulk-rna-seq denovo-assembly pacbio-sequencing bioinformatics-tool nanopore-sequencing single-cell-rna-seq

Created 2018-06-30

1,879 commits to master branch, last one 5 months ago

BioBlender21 PabloEnmanuelRamos

11

79

bsd-2-clause

14

Blender plugin to process biological data and molecular work.

python biology blender bioblender blender-addon bioinformatics bioinformatics-tool

Created 2020-04-09

225 commits to master branch, last one 2 years ago

ClinCNV imgag

2

71

mit

10

Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data

bioinformatics-tool copy-number-variation bioinformatics-algorithms

Created 2018-06-25

628 commits to master branch, last one 11 days ago

mnnpy chriscainx

32

71

bsd-3-clause

6

An implementation of MNN (Mutual Nearest Neighbors) correct in python.

mnn-correct batch-effects bioinformatics-tool single-cell-analysis mutual-nearest-neighbor biological-data-analysis

Created 2018-04-19

100 commits to master branch, last one about a year ago

FluentDNA josiahseaman

7

65

unknown

8

FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinfo...

ddv dna msa fasta fluent protein liftover alignment fluentdna sequencing visualization bioinformatics chain-alignment fasta-sequences bioinformatics-tool

Created 2016-03-02

533 commits to python-master branch, last one 2 years ago