11 results found Sort:

A genome visualization python package for comparative genomics
Created 2022-05-20
438 commits to main branch, last one about a month ago
microbiome R package
Created 2012-08-07
2,235 commits to master branch, last one 2 months ago
38
275
unknown
8
Rapid comparison and dereplication of genomes
Created 2016-09-27
276 commits to master branch, last one about a month ago
30
253
other
13
Build a partitioned pangenome graph from microbial genomes
Created 2017-10-20
2,215 commits to master branch, last one 2 months ago
15
112
gpl-3.0
6
Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.
Created 2019-06-19
198 commits to main branch, last one 24 days ago
19
92
other
6
Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by using evidence-based methods, as described in https://doi....
Created 2018-10-23
1,522 commits to main branch, last one 2 hours ago
Rapid determination of appropriate reference genomes.
Created 2018-11-01
225 commits to main branch, last one 24 days ago
34
83
gpl-3.0
14
An easy-to-use C++ application to count bacterial colonies (i.e. CFU).
Created 2012-02-01
85 commits to master branch, last one 3 years ago
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches
Created 2017-05-12
927 commits to master branch, last one 6 months ago
52
50
unknown
14
Collection of commonly used RDP Tools for easy building
Created 2013-06-17
108 commits to master branch, last one 4 years ago
A fast and accurate binning refinement tool to constructs high quality MAGs from the output of multiple binning tools.
Created 2023-01-18
323 commits to main branch, last one about a month ago