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microbiome R package
Created
2012-08-07
2,228 commits to master branch, last one about a year ago
A genome visualization python package for comparative genomics
Created
2022-05-20
415 commits to main branch, last one 2 days ago
Rapid comparison and dereplication of genomes
Created
2016-09-27
273 commits to master branch, last one 7 months ago
Build a partitioned pangenome graph from microbial genomes
Created
2017-10-20
2,131 commits to master branch, last one 12 days ago
Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.
Created
2019-06-19
195 commits to main branch, last one about a year ago
Rapid determination of appropriate reference genomes.
Created
2018-11-01
219 commits to main branch, last one 8 months ago
Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by using evidence-based methods, as described in https://doi....
Created
2018-10-23
1,452 commits to main branch, last one 4 days ago
An easy-to-use C++ application to count bacterial colonies (i.e. CFU).
Created
2012-02-01
85 commits to master branch, last one 3 years ago
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches
Created
2017-05-12
927 commits to master branch, last one about a month ago