2 results found Sort:

drostlab
orthologr drostlab
27
88
gpl-2.0
12
Genome wide orthology inference and dNdS estimation
r blast species biomartr genomics proteome comparative blast-searches entire-genomes codon-alignment dnds-estimation genomics-studies retrieve-genomes comparing-genomes orthologous-genes sequence-alignment orthology-inference sequence-alignments comparative-genomics comparative-genomics-studies
Created 2014-07-08
1,087 commits to master branch, last one about a year ago
vinuesa
get_phylomarkers vinuesa
8
54
other
4
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches
r bash perl markers genomics pipeline core-genome orthologues microbiology phylogenetics phylogenomics recombination species-trees codon-alignment clock-hypothesis maximum-likelihood phylogenetic-trees population-genetics species-delimitation phylogenomics-pipeline
Created 2017-05-12
927 commits to master branch, last one 4 months ago