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An analysis and visualization platform for 'omics data
Created
2014-02-26
19,444 commits to master branch, last one 5 days ago
Efficient phylogenomic software by maximum likelihood
This repository has been archived
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Created
2015-11-06
3,699 commits to master branch, last one 4 years ago
:floppy_disk: :page_with_curl: "Reads to report" for public health and clinical microbiology
Created
2015-01-08
354 commits to master branch, last one 4 years ago
A tool for drawing ANI clustermap between all-vs-all microbial genomes
Created
2022-03-24
83 commits to main branch, last one 5 months ago
a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference
Created
2020-04-11
291 commits to master branch, last one 16 days ago
a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies
Created
2020-05-12
430 commits to master branch, last one 16 days ago
BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins
Created
2019-11-14
36 commits to master branch, last one 2 months ago
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches
Created
2017-05-12
927 commits to master branch, last one 4 months ago
A tool for plotting CAFE5 gene family expansion/contraction result
Created
2023-03-03
16 commits to main branch, last one about a year ago