5 results found Sort:

lukasturcani
stk lukasturcani
51
254
mit
10
A Python library which allows construction and manipulation of complex molecules, as well as automatic molecular design and the creation of molecular databases.
chemistry reactions cheminformatics materials-design materials-science molecular-modeling materials-screening molecular-evolution molecular-structures computational-science materials-discoveries computational-chemistry
Created 2018-03-18
5,306 commits to master branch, last one 5 months ago
cogent3
cogent3 cogent3
67
129
bsd-3-clause
9
Comparative Genomics Toolkit 3
python biology genomics parallel pycogent biopython evolution statistics data-science markov-chain phylogenetics bioinformatics non-stationary signal-processing maximum-likelihood phylogenetic-trees sequence-alignment molecular-evolution biological-sequence-analysis
Created 2019-09-13
10,338 commits to develop branch, last one a day ago
FePhyFoFum
phyx FePhyFoFum
17
117
gpl-3.0
10
phylogenetics tools for linux (and other mostly posix compliant) computers
simulation phylogenetics molecular-evolution
Created 2013-02-14
1,502 commits to master branch, last one 2 months ago
chasewnelson
SNPGenie chasewnelson
37
111
gpl-3.0
9
Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
vcf dnds perl evolution vcf-files nucleotide snp-report nei-gojobori dnds-estimation fasta-sequences natural-selection sequence-analysis substitution-rate molecular-evolution population-genetics nucleotide-diversity diversity-measurement evolutionary-parameters next-generation-sequencing
Created 2015-05-24
236 commits to master branch, last one about a year ago
moshi4
CafePlotter moshi4
3
28
mit
3
A tool for plotting CAFE5 gene family expansion/contraction result
python evolution matplotlib phylogenetics phylogenomics bioinformatics phylogenetic-trees molecular-evolution
Created 2023-03-03
16 commits to main branch, last one about a year ago