Statistics for topic genomics

Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

Data intensive science for everyone.

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Robs manual for the computational genomics and bioinformatics class.

Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments

Robs manual for the computational genomics and bioinformatics class.

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Sequence-to-graph mapper and graph generator

Ultra-fast and memory-efficient (meta-)genome assembler

Data intensive science for everyone.

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Robs manual for the computational genomics and bioinformatics class.

Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena

MrBiomics - Modules & Recipes augment Bioinformatics for Multi-Omics Analyses at Scale

Robs manual for the computational genomics and bioinformatics class.

MSA(Multiple Sequence Alignment) visualization python package for sequence analysis

Toolkit for calling structural variants using short or long reads

Ultra-fast and memory-efficient (meta-)genome assembler

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Official git repository for Biopython (originally converted from CVS)

Data intensive science for everyone.

Oxford Nanopore's Basecaller

Complex structural variant visualization for HiFi sequencing data

MrBiomics - Modules & Recipes augment Bioinformatics for Multi-Omics Analyses at Scale

Arioc: GPU-accelerated DNA short-read alignment

Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.

MSA(Multiple Sequence Alignment) visualization python package for sequence analysis

Robs manual for the computational genomics and bioinformatics class.

Matrix dissimilarity from the differences of Moments and sparsity

Complex structural variant visualization for HiFi sequencing data

Official git repository for Biopython (originally converted from CVS)

Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

Oxford Nanopore's Basecaller

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

A versatile pairwise aligner for genomic and spliced nucleotide sequences

Easily install and load packages from the tidyomcis ecosystem

Matrix dissimilarity from the differences of Moments and sparsity

Application of pan-genome for population

🌿: ABM & GIS for philological, archaeological, and anthropological data.

AWS for Bioinformatics Researchers