11 results found Sort:

CamDavidsonPilon
lifelines CamDavidsonPilon
562
2.4k
mit
68
Survival analysis in Python
python statistics data-science cox-regression survival-analysis maximum-likelihood reliability-analysis
Created 2013-08-28
2,311 commits to master branch, last one 4 months ago
3dem
relion 3dem
205
466
gpl-2.0
49
Image-processing software for cryo-electron microscopy
ctf gui hpc cuda nvidia relion cryo-em likelihood microscope microscopy regularization atomistic-models image-processing molecular-biology maximum-likelihood graphics-programming molecular-structures biomolecular-dynamics optimization-algorithms high-performance-computing
Created 2017-01-26
7,154 commits to master branch, last one about a month ago
amkozlov
raxml-ng amkozlov
63
410
agpl-3.0
19
RAxML Next Generation: faster, easier-to-use and more flexible
mpi pthreads phylogenetics bioinformatics maximum-likelihood
Created 2016-12-08
488 commits to master branch, last one 10 months ago
Cibiv
IQ-TREE Cibiv
44
194
gpl-2.0
17
Efficient phylogenomic software by maximum likelihood
iq-tree mixture-model phylogenetics phylogenomics model-selection maximum-likelihood ultrafast-bootstrap
This repository has been archived (exclude archived)
Created 2015-11-06
3,699 commits to master branch, last one 4 years ago
stan-dev
cmdstanr stan-dev
63
145
other
16
CmdStanR: the R interface to CmdStan
mcmc stan bayes bayesian r-package maximum-likelihood variational-inference markov-chain-monte-carlo
Created 2019-10-01
3,401 commits to master branch, last one a day ago
cogent3
cogent3 cogent3
67
129
bsd-3-clause
9
Comparative Genomics Toolkit 3
python biology genomics parallel pycogent biopython evolution statistics data-science markov-chain phylogenetics bioinformatics non-stationary signal-processing maximum-likelihood phylogenetic-trees sequence-alignment molecular-evolution biological-sequence-analysis
Created 2019-09-13
10,254 commits to develop branch, last one a day ago
jamiemcg
BUSCO_phylogenomics jamiemcg
9
61
mit
5
BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins
bayesian genomics evolution phylogenetics phylogenomics bioinformatics maximum-likelihood
Created 2019-11-14
36 commits to master branch, last one 5 months ago
vinuesa
get_phylomarkers vinuesa
8
55
other
4
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches
r bash perl markers genomics pipeline core-genome orthologues microbiology phylogenetics phylogenomics recombination species-trees codon-alignment clock-hypothesis maximum-likelihood phylogenetic-trees population-genetics species-delimitation phylogenomics-pipeline
Created 2017-05-12
927 commits to master branch, last one 7 months ago
jkirkby3
pymle jkirkby3
13
47
mit
1
Maximum Likelihood estimation and Simulation for Stochastic Differential Equations (Diffusions)
fit mle sde sdes python fitting brownian milstein diffusion estimation likelihood simulation statistics ait-sahalia monte-carlo mle-estimation maximum-likelihood maximum-likelihood-estimation stochastic-differential-equations
Created 2021-04-13
73 commits to master branch, last one about a month ago
r-spatial
spatialreg r-spatial
11
46
unknown
8
spatialreg: spatial models estimation and testing
impacts bayesian maximum-likelihood spatial-dependence spatial-regression spatial-econometrics
Created 2019-03-23
185 commits to main branch, last one 5 days ago
viodotcom
ppca_rs viodotcom
2
35
mit
4
Python+Rust implementation of the Probabilistic Principal Component Analysis model
pca rust python data-science em-algorithm missing-data pca-analysis linear-algebra missing-values machine-learning maximum-likelihood dimensionality-reduction machine-learning-algorithms maximum-likelihood-estimation
Created 2022-11-24
92 commits to master branch, last one 6 months ago