5 results found Sort:

merenlab
anvio merenlab
145
443
gpl-3.0
30
An analysis and visualization platform for 'omics data
anvio python science javascript pangenomics metagenomics phylogenomics visualization bioinformatics metatranscriptomics population-genetics comparative-genomics
Created 2014-02-26
19,416 commits to master branch, last one a day ago
sortmerna
sortmerna sortmerna
68
246
gpl-3.0
15
SortMeRNA: next-generation sequence filtering and alignment tool
cpp ngs python alignment sequencing bioinformatics metatranscriptomics
Created 2014-03-14
1,343 commits to master branch, last one about a month ago
soedinglab
plass soedinglab
14
149
gpl-3.0
10
sensitive and precise assembly of short sequencing reads
proteins opensource proteomics metagenomics bioinformatics sequence-assembler metatranscriptomics
Created 2018-01-19
3,798 commits to master branch, last one about a month ago
jolespin
veba jolespin
9
77
agpl-3.0
4
A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes
genomics microbial microbiome metagenomics bioinformatics metatranscriptomics
Created 2022-04-20
460 commits to main branch, last one about a month ago
iquasere
KEGGCharter iquasere
6
52
bsd-3-clause
4
A tool for representing genomic potential and transcriptomic expression into KEGG pathways
kegg-pathway metagenomics kegg-ortholog metaproteomics metabolic-pathways metatranscriptomics
Created 2020-05-16
124 commits to master branch, last one 4 months ago