7 results found Sort:

FunctionLab
selene FunctionLab
91
375
bsd-3-clause-clear
17
a framework for training sequence-level deep learning networks
deep-learning sampling-methods genomic-data-analysis
Created 2017-08-21
860 commits to master branch, last one 5 days ago
genular
pandora genular
21
135
other
11
PANDORA :computer:
tsne umap pandora biomarkers clustering microbiome data-mining data-science clinical-data bioinformatics drug-discovery systems-biology transcriptomics data-integration machine-learning data-visualization predictive-analytics genomic-data-analysis unsupervised-machine-learning
Created 2018-07-03
1,546 commits to master branch, last one about a month ago
KarchinLab
open-cravat KarchinLab
28
116
mit
21
A modular annotation tool for genomic variants
python python3 genomics javascript bioinformatics annotation-tool variant-analysis variant-annotation bioinformatics-tool variant-annotations genomic-data-analysis bioinformatics-pipeline
Created 2018-07-03
2,754 commits to master branch, last one 4 days ago
thierrygosselin
radiator thierrygosselin
23
59
gpl-3.0
13
RADseq Data Exploration, Manipulation and Visualization using R
gbs filter radseq genetics genomics outliers paralogs imputation missingness radseq-data batch-effects normalization visualization heterozygosity outliers-detection artifacts-detection genotype-likelihoods genomic-data-analysis genomics-visualization genotyping-by-sequencing
Created 2017-06-18
638 commits to master branch, last one about a month ago
zhaoxiaofei
bindash zhaoxiaofei
7
58
other
5
Fast and precise comparison of genomes and metagenomes (in the order of terabytes) on a typical personal laptop
big-data bioinformatics genomic-data-analysis dimensionality-reduction locality-sensitive-hashing
Created 2018-04-19
122 commits to master branch, last one 8 months ago
muellan
metacache muellan
11
57
gpl-3.0
7
memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
fasta fastq genome refseq taxonomy long-reads metagenomes ncbi-refseq metagenomics read-mapping dna-sequences bioinformatics classification metagenomic-data short-read-mapper bioinformatics-tool metagenomic-analysis genomic-data-analysis bioinformatics-algorithms metagenomic-classification
Created 2017-02-07
1,029 commits to master branch, last one 2 months ago
bobeobibo
phigaro bobeobibo
15
50
mit
4
Phigaro is a scalable command-line tool for predicting phages and prophages
phage phages genomics prophage bioinformatics genomic-regions bioinformatics-tool genomic-data-analysis bioinformatics-analysis bioinformatics-pipeline biological-data-analysis
Created 2017-08-21
271 commits to master branch, last one 11 months ago