8 results found Sort:

BaranziniLab
KG_RAG BaranziniLab
84
623
apache-2.0
16
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
gpt llm rag gpt4 llama llama2 gpt35turbo bert-models context-aware prompt-tuning bioinformatics knowledge-base knowledge-graph prompt-engineering large-language-models sentence-transformers biomedical-informatics biomedical-applications bioinformatics-algorithms retrieval-augmented-generation
Created 2023-11-11
581 commits to main branch, last one 14 days ago
dynverse
dynbenchmark dynverse
39
192
other
16
Comparison of methods for trajectory inference on single-cell data 🥇
benchmarking trajectory-inference bioinformatics-algorithms
Created 2017-09-06
3,322 commits to master branch, last one about a year ago
dynverse
dynmethods dynverse
26
119
other
10
A collection of 50+ trajectory inference methods within a common interface 📥📤
single-cell-rna-seq single-cell-analysis trajectory-inference pseudotemporal-ordering bioinformatics-algorithms trajectory-inference-methods
Created 2017-11-14
1,315 commits to master branch, last one 9 months ago
GregorySchwartz
too-many-cells GregorySchwartz
19
104
gpl-3.0
3
Cluster single cells and analyze cell clade relationships with colorful visualizations.
single-cell visualization single-cell-rna-seq single-cell-analysis bioinformatics-pipeline bioinformatics-algorithms
Created 2019-01-10
392 commits to master branch, last one 9 months ago
rcedgar
usearch12 rcedgar
8
78
gpl-3.0
4
Open-source usearch
bioinformatics protein-alignment protein-sequences search-algorithms nucleotide-alignment computational-biology bioinformatics-algorithms
Created 2024-02-16
214 commits to master branch, last one 3 months ago
imgag
ClinCNV imgag
2
71
mit
10
Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
bioinformatics-tool copy-number-variation bioinformatics-algorithms
Created 2018-06-25
628 commits to master branch, last one 3 months ago
muellan
metacache muellan
12
57
gpl-3.0
7
memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
fasta fastq genome refseq taxonomy long-reads metagenomes ncbi-refseq metagenomics read-mapping dna-sequences bioinformatics classification metagenomic-data short-read-mapper bioinformatics-tool metagenomic-analysis genomic-data-analysis bioinformatics-algorithms metagenomic-classification
Created 2017-02-07
1,028 commits to master branch, last one 6 months ago
rcedgar
reseek rcedgar
3
27
gpl-3.0
3
Protein structure alignment and search algorithm
bioinformatics search-algorithm protein-sequences protein-structure bioinformatics-tool computational-biology bioinformatics-algorithms
Created 2024-05-21
394 commits to master branch, last one about a month ago