6 results found Sort:

sigven
pcgr sigven
48
252
mit
24
Personal Cancer Genome Reporter (PCGR)
vcf snvs tumor cancer somatic clinical interpreter oncology-data annotation-tool cancer-genomics cancer-variants reporting-engine precision-oncology therapeutic-targets annotation-framework copy-number-variation variant-interpretation precision-cancer-medicine
Created 2017-03-20
1,173 commits to main branch, last one about a month ago
gavinha
TitanCNA gavinha
36
93
gpl-3.0
3
Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer
hmm 10x-genomics genome-sequencing tumor-heterogeneity copy-number-variation
Created 2015-01-21
292 commits to master branch, last one 3 years ago
AntonioDeFalco
SCEVAN AntonioDeFalco
25
90
gpl-3.0
4
R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of mali...
scrna-seq aneuploidy copynumber single-cell scrna-pipeline clonal-analysis tumor-evolution clonal-evolution microenvironment scrna-seq-analysis tumor-heterogeneity tumor-classification copy-number-variation subclonal-deconvolution subclone-identification
Created 2021-07-05
215 commits to main branch, last one 3 months ago
imgag
ClinCNV imgag
2
71
mit
10
Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
bioinformatics-tool copy-number-variation bioinformatics-algorithms
Created 2018-06-25
628 commits to master branch, last one 3 months ago
Genotek
ClassifyCNV Genotek
14
60
other
8
ClassifyCNV: a tool for clinical annotation of copy-number variants
cnv deletion annotations duplication pathogenicity bioinformatics clinical-genomics copy-number-variation
Created 2020-07-15
21 commits to master branch, last one about a year ago
flowhub-team
CNV flowhub-team
0
59
mit
1
Copy Number Variation
cnv genome genomics copynumbervariation copy-number-variation
Created 2023-06-27
11 commits to main branch, last one about a year ago