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zhanghao-njmu
SCP zhanghao-njmu
100
469
gpl-3.0
8
An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
scanpy seurat anndata scrna-seq shiny-app shinyapps scatac-seq shiny-apps single-cell scrna-pipeline seurat-objects single-cell-omics scrna-seq-analysis single-cell-rna-seq single-cell-analysis single-cell-atac-seq single-cell-genomics single-cell-pipeline single-cell-sequencing
Created 2022-03-30
308 commits to main branch, last one about a year ago
AntonioDeFalco
SCEVAN AntonioDeFalco
25
100
gpl-3.0
4
R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of mali...
scrna-seq aneuploidy copynumber single-cell scrna-pipeline clonal-analysis tumor-evolution clonal-evolution microenvironment scrna-seq-analysis tumor-heterogeneity tumor-classification copy-number-variation subclonal-deconvolution subclone-identification
Created 2021-07-05
238 commits to main branch, last one 19 days ago