AntonioDeFalco / SCEVAN

R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of malignant cells, identifies subclonal structures and analyses the specific and shared alterations of each subpopulation.

Date Created 2021-07-05 (2 years ago)

Commits 215 (last one 20 days ago)

Stargazers 86 (0 this week)

Watchers 4 (0 this week)

Forks 25

License gpl-3.0

Ranking

RepositoryStats indexes 534,880 repositories, of these AntonioDeFalco/SCEVAN is ranked #301,019 (44th percentile) for total stargazers, and #354,941 for total watchers. Github reports the primary language for this repository as HTML, for repositories using this language it is ranked #7,626/13,990.

Other Information

AntonioDeFalco/SCEVAN has Github issues enabled, there are 25 open issues and 90 closed issues.

There have been 2 releases, the latest one was published on 2024-02-06 (4 months ago) with the name SCEVAN.

Homepage URL: https://www.nature.com/articles/s41467-023-36790-9

All Topics

scrna-seq aneuploidy copynumber single-cell scrna-pipeline clonal-analysis tumor-evolution clonal-evolution microenvironment scrna-seq-analysis tumor-heterogeneity tumor-classification copy-number-variation subclonal-deconvolution subclone-identification

Star History

Github stargazers over time

Watcher History

Github watchers over time, collection started in '23

Recent Commit History

98 commits on the default branch (main) since jan '22

Yearly Commits

Commits to the default branch (main) per year

Issue History

Languages

The primary language is HTML but there's also others...

updated: 2024-06-28 @ 11:42pm, id: 383120203 / R_kgDOFtXzSw