AntonioDeFalco / SCEVAN

R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of malignant cells, identifies subclonal structures and analyses the specific and shared alterations of each subpopulation.

Date Created 2021-07-05 (3 years ago)

Commits 215 (last one 5 months ago)

Stargazers 93 (0 this week)

Watchers 4 (0 this week)

Forks 24

License gpl-3.0

Ranking

RepositoryStats indexes 584,777 repositories, of these AntonioDeFalco/SCEVAN is ranked #305,055 (48th percentile) for total stargazers, and #373,442 for total watchers. Github reports the primary language for this repository as HTML, for repositories using this language it is ranked #7,694/15,198.

Other Information

AntonioDeFalco/SCEVAN has Github issues enabled, there are 30 open issues and 95 closed issues.

There have been 2 releases, the latest one was published on 2024-02-06 (9 months ago) with the name SCEVAN.

Homepage URL: https://www.nature.com/articles/s41467-023-36790-9

All Topics

scrna-seq aneuploidy copynumber single-cell scrna-pipeline clonal-analysis tumor-evolution clonal-evolution microenvironment scrna-seq-analysis tumor-heterogeneity tumor-classification copy-number-variation subclonal-deconvolution subclone-identification

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98 commits on the default branch (main) since jan '22

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The primary language is HTML but there's also others...

updated: 2024-11-21 @ 01:54am, id: 383120203 / R_kgDOFtXzSw