4 results found Sort:

dellytools
delly dellytools
136
430
bsd-3-clause
34
DELLY2: Structural variant discovery by integrated paired-end and split-read analysis
svs delly tumor genomic germline delly-users sv-discovery rearrangement cancer-genomics structural-variation
Created 2013-11-15
1,400 commits to main branch, last one 3 days ago
sigven
pcgr sigven
48
252
mit
24
Personal Cancer Genome Reporter (PCGR)
vcf snvs tumor cancer somatic clinical interpreter oncology-data annotation-tool cancer-genomics cancer-variants reporting-engine precision-oncology therapeutic-targets annotation-framework copy-number-variation variant-interpretation precision-cancer-medicine
Created 2017-03-20
1,173 commits to main branch, last one about a month ago
digitalcytometry
ecotyper digitalcytometry
42
178
other
3
EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.
tumor single-cell bulk-rna-seq deconvolution microenvironment
Created 2021-06-08
74 commits to master branch, last one 6 months ago
marcpaga
sturgeon marcpaga
8
30
other
2
Sturgeon is a CNS neural network classifier
cns tumor nanopore classification
Created 2023-02-15
132 commits to main branch, last one about a month ago