3 results found Sort:

dellytools
delly dellytools
138
450
bsd-3-clause
34
DELLY2: Structural variant discovery by integrated paired-end and split-read analysis
svs delly tumor genomic germline delly-users sv-discovery rearrangement cancer-genomics structural-variation
Created 2013-11-15
1,413 commits to main branch, last one 2 days ago
nf-core
sarek nf-core
417
412
mit
135
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
conda gatk4 cancer nf-core somatic genomics germline nextflow pipeline workflow annotation containers target-panels bioinformatics pre-processing variant-calling reproducible-research whole-exome-sequencing whole-genome-sequencing next-generation-sequencing
Created 2019-04-30
7,940 commits to master branch, last one 9 days ago
sigven
gvanno sigven
11
57
unknown
7
Generic human DNA variant annotation pipeline
snv vcf vep gene snvs docker indels vcfanno germline variants workflow singularity annotation-tool variant-annotations annotation-framework disease-gene-association
Created 2017-01-21
98 commits to master branch, last one 10 months ago