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A DSL for data-driven computational pipelines
Created
2013-03-27
6,828 commits to master branch, last one 2 days ago
Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.
Created
2015-10-09
13,798 commits to master branch, last one 2 years ago
Apptainer: Application containers for Linux
Created
2021-11-30
16,925 commits to main branch, last one 3 days ago
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme et al. (2021), https://doi.org/10.1093/nar/gkab294
Created
2014-12-16
573 commits to master branch, last one about a month ago
HPC Container Maker
Created
2018-03-22
469 commits to master branch, last one 20 days ago
Molecular dynamics and Monte Carlo soft matter simulation on GPUs.
Created
2018-09-06
25,054 commits to trunk-patch branch, last one 6 days ago
Container-native task automation engine.
Created
2015-10-02
674 commits to master branch, last one 3 years ago
A docker image for converting docker images to singularity images.
Created
2016-08-05
201 commits to master branch, last one 6 months ago
Simplify HPC and Batch workloads on Azure
This repository has been archived
(exclude archived)
Created
2016-08-26
923 commits to master branch, last one about a year ago
:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
Created
2018-09-05
3,219 commits to master branch, last one a day ago
Docker/Singularity image for Ubuntu with X11 and VNC
Created
2017-03-29
650 commits to main branch, last one about a year ago
Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.
Created
2021-04-02
643 commits to main branch, last one 16 days ago
server for storage and management of singularity images
Created
2017-08-03
864 commits to master branch, last one 7 months ago
HIPAA & GDPR compliant ready parse-server with postgres/mongo, parse-hipaa-dashboard. Compatible with ParseCareKit
Created
2020-03-16
382 commits to main branch, last one 10 days ago
Nextflow pipeline for analysis of direct RNA Nanopore reads
Created
2019-10-10
318 commits to MOP3 branch, last one about a month ago
Create container images for using Julia packages (especially useful in environments without Internet access)
Created
2020-01-16
113 commits to master branch, last one 3 years ago
Snakemake pipelines for nanopore sequencing data archiving and processing
This repository has been archived
(exclude archived)
Created
2018-11-12
599 commits to master branch, last one 3 years ago
orchestration for singularity containers (under development)
Created
2019-05-27
113 commits to master branch, last one 8 months ago
Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data ...
Created
2019-04-24
3,688 commits to master branch, last one 5 months ago
An example GitHub Action (CI) to build a Singularity container
Created
2019-08-15
25 commits to master branch, last one about a year ago
[CVPR 2024] Tackling the Singularities at the Endpoints of Time Intervals in Diffusion Models
Created
2024-03-02
9 commits to main branch, last one 9 months ago
A nextflow pipeline to perform state-of-the-art genome-wide association studies.
Created
2021-06-15
613 commits to main branch, last one about a month ago
streamlined singularity python client (spython) for singularity
Created
2018-02-07
572 commits to master branch, last one 4 months ago
Generic human DNA variant annotation pipeline
Created
2017-01-21
98 commits to master branch, last one 11 months ago
Port Forwarding Utility
Created
2018-07-06
77 commits to master branch, last one about a year ago
You should offer both Podman and Apptainer with name spaces on your HPC systems
Created
2022-05-25
15 commits to main branch, last one 9 months ago
Singularity容器运行 deepin wine 微信
Created
2021-04-19
12 commits to master branch, last one 9 months ago
The Zavolab Automated RNA-seq Pipeline
Created
2021-08-30
287 commits to dev branch, last one 5 months ago
On-demand containers provisioning service
Created
2022-01-25
1,390 commits to master branch, last one 16 hours ago