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A DSL for data-driven computational pipelines
Created
2013-03-27
6,521 commits to master branch, last one 8 days ago
Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.
Created
2015-10-09
13,798 commits to master branch, last one about a year ago
Apptainer: Application containers for Linux
Created
2021-11-30
16,516 commits to main branch, last one 17 hours ago
HPC Container Maker
Created
2018-03-22
457 commits to master branch, last one 22 days ago
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme et al. (2021), https://doi.org/10.1093/nar/gkab294
Created
2014-12-16
524 commits to master branch, last one 10 months ago
Molecular dynamics and Monte Carlo soft matter simulation on GPUs.
Created
2018-09-06
23,718 commits to trunk-patch branch, last one a day ago
Container-native task automation engine.
Created
2015-10-02
674 commits to master branch, last one 2 years ago
Simplify HPC and Batch workloads on Azure
This repository has been archived
(exclude archived)
Created
2016-08-26
923 commits to master branch, last one about a year ago
A docker image for converting docker images to singularity images.
Created
2016-08-05
198 commits to master branch, last one 5 months ago
:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
Created
2018-09-05
2,875 commits to master branch, last one 22 hours ago
Docker/Singularity image for Ubuntu with X11 and VNC
Created
2017-03-29
650 commits to main branch, last one 8 months ago
Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.
Created
2021-04-02
637 commits to main branch, last one 3 months ago
server for storage and management of singularity images
Created
2017-08-03
862 commits to master branch, last one 9 months ago
HIPAA & GDPR compliant ready parse-server with postgres/mongo, parse-hipaa-dashboard. Compatible with ParseCareKit
Created
2020-03-16
372 commits to main branch, last one 15 hours ago
Create container images for using Julia packages (especially useful in environments without Internet access)
Created
2020-01-16
113 commits to master branch, last one 2 years ago
Snakemake pipelines for nanopore sequencing data archiving and processing
This repository has been archived
(exclude archived)
Created
2018-11-12
599 commits to master branch, last one 2 years ago
Nextflow pipeline for analysis of direct RNA Nanopore reads
Created
2019-10-10
292 commits to v1.1 branch, last one about a year ago
orchestration for singularity containers (under development)
Created
2019-05-27
113 commits to master branch, last one about a month ago
An example GitHub Action (CI) to build a Singularity container
Created
2019-08-15
25 commits to master branch, last one about a year ago
Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data ...
Created
2019-04-24
3,605 commits to master branch, last one 22 days ago
A nextflow pipeline to perform state-of-the-art genome-wide association studies.
Created
2021-06-15
611 commits to main branch, last one about a month ago
streamlined singularity python client (spython) for singularity
Created
2018-02-07
569 commits to master branch, last one 6 months ago
[CVPR 2024] Tackling the Singularities at the Endpoints of Time Intervals in Diffusion Models
Created
2024-03-02
9 commits to main branch, last one 2 months ago
Generic human DNA variant annotation pipeline
Created
2017-01-21
98 commits to master branch, last one 4 months ago
Singularity容器运行微信
Created
2021-04-19
12 commits to master branch, last one 2 months ago
You should offer both Podman and Apptainer with name spaces on your HPC systems
Created
2022-05-25
15 commits to main branch, last one 2 months ago