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Sacred is a tool to help you configure, organize, log and reproduce experiments developed at IDSIA.
Created
2014-03-31
1,344 commits to master branch, last one 6 months ago
A DSL for data-driven computational pipelines
Created
2013-03-27
6,485 commits to master branch, last one a day ago
Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.
Created
2015-10-09
13,798 commits to master branch, last one about a year ago
Workflow Description Language - Specification and Implementations
Created
2012-08-01
627 commits to wdl-1.1 branch, last one 2 days ago
rrtools: Tools for Writing Reproducible Research in R
Created
2017-07-21
416 commits to master branch, last one 2 months ago
A workflow for reproducible and open scientific articles
Created
2021-07-06
1,550 commits to main branch, last one about a month ago
ReproZip is a tool that simplifies the process of creating reproducible experiments from command-line executions, a frequently-used common denominator in computational science.
Created
2014-05-06
2,399 commits to 1.x branch, last one 3 months ago
A curated list of reproducible research case studies, projects, tutorials, and media
Created
2017-11-15
430 commits to master branch, last one 2 days ago
Create powerful Hydra applications without the yaml files and boilerplate code.
Created
2021-04-02
1,541 commits to main branch, last one 2 days ago
Package an R workspace and all dependencies as a Docker container
Created
2016-07-06
402 commits to master branch, last one 2 years ago
Papers with code for single cell related papers
Created
2020-07-27
32 commits to master branch, last one 10 months ago
High performance spatial analysis in a web browser, Node.js, and across programming languages and hardware architectures
Created
2015-11-09
3,667 commits to main branch, last one a day ago
🐳 Containerize R Markdown documents for continuous reproducibility
Created
2015-07-11
222 commits to master branch, last one 2 months ago
Log shell-commands and used files. Snapshot executed scripts. Fully automatic.
Created
2019-07-21
212 commits to master branch, last one 3 months ago
The Turing Change Point Detection Benchmark: An Extensive Benchmark Evaluation of Change Point Detection Algorithms on real-world data
Created
2020-01-06
124 commits to master branch, last one about a year ago
Data Analysis Workflows & Reproducibility Learning Resources
Created
2020-03-11
29 commits to master branch, last one 3 years ago
dcmjs is a javascript cross-compile of dcmtk (dcmtk.org).
Created
2014-05-07
102 commits to master branch, last one 2 years ago
SEER, reimplemented in python 🐍🔮
Created
2017-09-22
526 commits to master branch, last one 6 months ago
Electromagnetic methods in geophysics - open educational resources.
Created
2015-09-22
2,919 commits to main branch, last one 2 years ago
Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads
Created
2019-08-06
459 commits to master branch, last one 2 months ago
This is the repository for the Literate Programming Workshop
Created
2021-02-26
72 commits to main branch, last one 3 months ago