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OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages
Created
2015-10-13
5,882 commits to master branch, last one a day ago
⚡High Performance DICOM Medical Image Parser in Go.
Created
2018-10-17
275 commits to main branch, last one about a month ago
tracking medical datasets, with a focus on medical imaging
Created
2019-02-26
102 commits to master branch, last one about a year ago
MagicScaler high-performance, high-quality image processing pipeline for .NET
Created
2017-01-16
357 commits to master branch, last one about a month ago
An elegant Python interface for visualization on the web platform to interactively generate insights into multidimensional images, point sets, and geometry.
Created
2018-02-15
648 commits to main branch, last one 4 months ago
Apache Commons Imaging (previously Sanselan) is a pure-Java image library
Created
2013-07-11
2,777 commits to master branch, last one a day ago
Create 3d rooms in blender from floorplans.
Created
2019-03-25
181 commits to master branch, last one 2 months ago
Operator Discretization Library https://odlgroup.github.io/odl/
Created
2015-11-05
4,963 commits to master branch, last one 28 days ago
HDR Toolbox for processing High Dynamic Range (HDR) images into MATLAB and Octave
Created
2012-08-30
155 commits to master branch, last one 4 months ago
cell detection in calcium imaging recordings
Created
2018-07-16
2,332 commits to main branch, last one 3 days ago
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
Created
2020-01-24
514 commits to main branch, last one 26 days ago
Scientific analysis of nanoscale materials imaging data
Created
2016-06-18
4,051 commits to main branch, last one about a month ago
starfish: unified pipelines for image-based transcriptomics
Created
2017-05-26
1,451 commits to master branch, last one a day ago
High performance spatial analysis in a web browser and across programming languages and hardware architectures
Created
2015-11-09
4,185 commits to main branch, last one a day ago
Deep and Machine Learning for Microscopy
imaging
pytorch
materials
microscopy
deep-learning
jupyter-notebook
machine-learning
ensemble-learning
materials-science
electron-microscopy
google-colaboratory
deep-kernel-learning
multivariate-analysis
semantic-segmentation
variational-autoencoders
scanning-probe-microscopy
fully-convolutional-networks
Created
2020-09-04
1,412 commits to master branch, last one 11 months ago
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
Created
2018-12-14
1,287 commits to main branch, last one 16 days ago
Automated 3D cell detection in very large images
Created
2020-01-17
752 commits to main branch, last one about a month ago
Differentiable Computational Lithogrpahy Framework
Created
2023-02-11
20 commits to main branch, last one 2 months ago
A Python package housing a collection of deep-learning multi-modal data fusion method pipelines! From data loading, to training, to evaluation - fusilli's got you covered 🌸
Created
2023-08-16
252 commits to main branch, last one 3 months ago
Kaapana (from the hawaiian word kaʻāpana, meaning “distributor” or “part”) is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications ...
Created
2020-08-06
4,439 commits to develop branch, last one 15 days ago
smallish ice40 / raspberrypi ultrasound hardware
Created
2018-03-01
98 commits to master branch, last one 8 months ago
Object Pascal image loading, saving and manipulation library.
Created
2017-11-03
324 commits to master branch, last one 5 months ago
All things Miniscope v4
Created
2019-04-25
245 commits to master branch, last one about a year ago
BIDScoin converts your source-level neuroimaging data to BIDS
Created
2018-04-19
4,105 commits to master branch, last one 25 days ago
Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.
Created
2018-10-27
468 commits to master branch, last one 29 days ago
A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.
Created
2022-03-20
133 commits to main branch, last one 3 months ago
Tools and libraries that deal with the creation and processing of images.
Created
2014-09-29
97 commits to master branch, last one 2 years ago
dcmjs is a javascript cross-compile of dcmtk (dcmtk.org).
Created
2014-05-07
102 commits to master branch, last one 3 years ago
A Slicer extension to provide a GUI around pyradiomics
Created
2016-12-02
146 commits to master branch, last one 8 months ago
Easy to use DICOMWEB enabled PACS with DIMSE services based on sqlite database
Created
2020-09-27
151 commits to master branch, last one 23 days ago