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QuPath - Bioimage analysis & digital pathology
Created
2016-08-28
3,573 commits to main branch, last one 2 days ago
StarDist - Object Detection with Star-convex Shapes
Created
2018-06-26
949 commits to main branch, last one 2 months ago
GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data
Created
2020-03-18
1,846 commits to master branch, last one about a month ago
A vision-language foundation model for computational pathology - Nature Medicine
Created
2023-12-31
10 commits to main branch, last one 2 months ago
AI-based pathology predicts origins for cancers of unknown primary - Nature
Created
2020-06-19
26 commits to master branch, last one 2 years ago
A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.
Created
2022-03-20
127 commits to main branch, last one about a month ago
Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering
Created
2021-05-31
69 commits to main branch, last one about a year ago
A tool for cell instance aware segmentation in densely packed 3D volumetric images
Created
2019-10-18
1,027 commits to master branch, last one 17 days ago
Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.
Created
2014-05-06
2,929 commits to master branch, last one 29 days ago
A deep-learning pipeline for segmentation of ambiguous microscopic images.
Created
2020-02-03
485 commits to master branch, last one 16 days ago