9 results found Sort:

Image-Py
imagepy Image-Py
329
1.3k
bsd-4-clause
80
Image process framework based on plugin like imagej, it is esay to glue with scipy.ndimage, scikit-image, opencv, simpleitk, mayavi...and any libraries based on numpy
imagej opencv simpleitk scikit-image
Created 2016-12-29
711 commits to master branch, last one 4 months ago
qupath
qupath qupath
267
993
gpl-3.0
57
QuPath - Bioimage analysis & digital pathology
groovy imagej javafx opencv histology pathology cell-analysis image-processing machine-learning bioimage-analysis cell-segmentation digital-pathology whole-slide-imaging bioimage-informatics computational-pathology tissue-microarray-analysis
Created 2016-08-28
3,573 commits to main branch, last one 2 days ago
cgohlke
tifffile cgohlke
154
501
bsd-3-clause
9
Read and write TIFF files
tiff zarr image numpy imagej python ome-tiff format-reader life-sciences-image whole-slide-imaging
Created 2020-02-22
560 commits to master branch, last one 10 days ago
hallvaaw
awesome-biological-image-analysis hallvaaw
19
100
cc0-1.0
5
A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.
imagej awesome biology imaging microscopy awesome-list cellprofiler segmentation image-analysis image-processing bioimage-analysis
Created 2022-03-20
127 commits to main branch, last one about a month ago
ijpb
MorphoLibJ ijpb
50
98
lgpl-3.0
17
Collection of mathematical morphology methods and plugins for ImageJ
fiji imagej 3d-images morpholibj image-analysis image-processing mathematical-morphology
Created 2014-02-10
1,588 commits to master branch, last one 3 days ago
imjoy-team
imagej.js imjoy-team
6
80
mit
5
ImageJS--Image analysis in the browser with ImageJ
imagej image-processing
Created 2020-08-26
386 commits to master branch, last one 2 months ago
scenerygraphics
sciview scenerygraphics
18
62
bsd-2-clause
9
sciview is a tool for visualization and interaction with ND image and mesh data
3d fiji imagej scenery sciview hacktoberfest visualization image-processing
Created 2016-07-07
1,726 commits to main branch, last one 16 days ago
cgohlke
roifile cgohlke
5
60
bsd-3-clause
7
Read and write ImageJ ROI format
imagej python format-reader region-of-interest
Created 2020-02-22
69 commits to master branch, last one about a month ago
knime-ip
knip knime-ip
12
49
unknown
17
KNIME Image Processing Extension
fiji java image knime imagej imagej2 imglib2 scijava analysis processing integration
Created 2013-09-12
2,090 commits to master branch, last one 11 months ago