13 results found Sort:

mahmoodlab
CLAM mahmoodlab
371
1.2k
gpl-3.0
21
Open source tools for computational pathology - Nature BME
clam pathology tcga-data camelyon16 camelyon17 mahmoodlab deep-learning data-efficient histopathology digital-pathology whole-slide-imaging bioimage-informatics quantitative-pathology computational-pathology weakly-supervised-learning
Created 2020-04-01
121 commits to master branch, last one 15 days ago
mahmoodlab
UNI mahmoodlab
52
366
other
7
Towards a general-purpose foundation model for computational pathology - Nature Medicine
uni mass-100k pathology foundation mahmoodlab pathology-fm histopathology nature-medicine foundation-model pathology-dinov2 digital-pathology pathology-foundation uni-foundation-model quantitative-pathology computational-pathology pathology-self-supervised pathology-foundation-model
Created 2024-02-02
27 commits to main branch, last one 3 months ago
mahmoodlab
CONCH mahmoodlab
23
291
other
3
A vision-language foundation model for computational pathology - Nature Medicine
conch pathology mahmoodlab histopathology medical-imaging nature-medicine foundation-model bioimage-analysis digital-pathology health-informatics bioimage-informatics nlp-machine-learning quantitative-pathology computational-pathology vision-language-pathology
Created 2023-12-31
14 commits to main branch, last one 4 months ago
mahmoodlab
PathomicFusion mahmoodlab
83
280
gpl-3.0
14
Fusing Histology and Genomics via Deep Learning - IEEE TMI
fusion genomics pathomic pathology mahmoodlab multimodal histopathology transcriptomics multimodal-network computational-pathogenomics
Created 2019-12-14
46 commits to master branch, last one 2 years ago
mahmoodlab
PORPOISE mahmoodlab
37
190
gpl-3.0
4
Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell
genomics histology mahmoodlab wsi-images pan-cancer-analysis
Created 2021-01-19
20 commits to master branch, last one about a year ago
mahmoodlab
MCAT mahmoodlab
36
178
gpl-3.0
4
Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images - ICCV 2021
mcat genomics pathology mahmoodlab multimodal early-fusion multimodal-fusion multimodal-deep-learning
Created 2021-04-16
29 commits to master branch, last one 2 years ago
mahmoodlab
TOAD mahmoodlab
48
170
agpl-3.0
5
AI-based pathology predicts origins for cancers of unknown primary - Nature
cup deep toad histology pathology mahmoodlab wsi-images deep-learning histopathology cancer-research unknown-primary cancer-detection bioimage-analysis bioimage-informatics cancer-imaging-research
Created 2020-06-19
26 commits to master branch, last one 3 years ago
mahmoodlab
Patch-GCN mahmoodlab
30
133
gpl-3.0
5
Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021
gcn wsi pathology mahmoodlab wsi-images histopathology survival-prediction
Created 2021-05-21
37 commits to master branch, last one 10 months ago
mahmoodlab
SurvPath mahmoodlab
5
115
unknown
4
Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024
pathways survpath pathology mahmoodlab interpretability pathology-genomics pathology-representation histology-transcriptomics
Created 2023-04-13
23 commits to main branch, last one about a month ago
mahmoodlab
SISH mahmoodlab
26
99
gpl-3.0
4
Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering
fish vqvae histology pathology mahmoodlab wsi-images deep-learning histopathology image-retrieval bioimage-analysis image-search-engine bioimage-informatics
Created 2021-05-31
69 commits to main branch, last one about a year ago
mahmoodlab
MI-Zero mahmoodlab
5
97
other
4
Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images - CVPR 2023
mil pathology mahmoodlab digital-pathology zero-shot-learning zero-shot-pathology image-text-pathology quantitative-pathology computational-pathology vision-language-pathology
Created 2023-04-17
12 commits to main branch, last one about a year ago
mahmoodlab
TANGLE mahmoodlab
3
86
other
3
Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024
tangle pathology mahmoodlab pathology-genomics contrastive-learning pathology-representation histology-transcriptomics pathology-transcriptomics slide-representation-learning
Created 2024-03-17
77 commits to main branch, last one 2 months ago
mahmoodlab
HistoFL mahmoodlab
13
47
unknown
2
Federated Learning for Computational Pathology - Medical Image Analysis
pathology mahmoodlab histology-images federated-learning
Created 2021-05-19
9 commits to master branch, last one 2 years ago