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Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for ...
Created
2018-12-26
100 commits to master branch, last one 6 months ago
Library for Digital Pathology Image Processing
Created
2020-05-09
1,482 commits to main branch, last one 2 months ago
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Publ...
Created
2011-10-04
22,215 commits to develop branch, last one a day ago
Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021
Created
2021-05-21
37 commits to master branch, last one 11 months ago
Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024
Created
2020-04-07
36 commits to master branch, last one 3 years ago
a browser-based DICOM viewer
Created
2020-04-01
303 commits to master branch, last one a day ago
A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
Created
2021-09-07
643 commits to main branch, last one about a month ago
Conversion tool/library for converting whole slide images to DICOM
Created
2019-06-11
398 commits to develop branch, last one 10 months ago
This is the official repository for our CVPR 2023 paper 'Task-Specific Fine-Tuning via Variational Information Bottleneck for Weakly-Supervised Pathology Whole Slide Image Classification'.
Created
2023-03-14
24 commits to main branch, last one 8 months ago
A pipeline to segment tissue from the background in histological images
Created
2018-11-14
141 commits to master branch, last one 4 years ago
Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
Created
2019-10-04
151 commits to master branch, last one about a year ago
DAS-MIL: Distilling Across Scales for MILClassification of Histological WSIs
Created
2023-05-04
96 commits to main branch, last one 22 days ago
Raccoon is a NoSQL-based medical image archive for managing the DICOM images.
Created
2020-11-20
327 commits to main branch, last one about a year ago
Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning
Created
2020-09-03
1 commits to master branch, last one 4 years ago
Official Inplementation of 《WsiCaption: Multiple Instance Generation of Pathology Reports for Gigapixel Whole Slide Images》(MICCAI 2024 Oral/ Best Paper Candidate)
Created
2024-01-22
50 commits to master branch, last one 17 days ago
The code for Kernel attention transformer (KAT)
Created
2022-06-20
24 commits to main branch, last one about a year ago