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Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
Created
2016-01-06
833 commits to master branch, last one about a month ago
TCGAbiolinks
Created
2015-03-02
28,940 commits to master branch, last one 8 months ago
Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024
Created
2020-04-07
36 commits to master branch, last one 3 years ago
Make TCGA download and prepare easy!
Created
2023-04-19
32 commits to main branch, last one 7 months ago
:package: An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/
Created
2019-03-31
265 commits to master branch, last one about a month ago
Provide R access to the NCI Genomic Data Commons portal.
Created
2016-06-08
619 commits to devel branch, last one about a month ago
Bioconductor package for management of multi-assay data
Created
2013-07-22
1,742 commits to devel branch, last one a day ago
BioBombe: Sequentially compressed gene expression features enhances biological signatures
Created
2018-03-22
234 commits to master branch, last one 3 years ago
This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.
Created
2023-04-25
15 commits to main branch, last one 3 days ago
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
Created
2016-05-27
834 commits to master branch, last one 9 months ago