42 results found Sort:

145
485
lgpl-3.0
39
Accurate sample inference from amplicon data with single nucleotide resolution
Created 2014-12-17
799 commits to master branch, last one about a month ago
41
306
unknown
7
karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
Created 2016-06-07
581 commits to devel branch, last one about a year ago
TCGAbiolinks
Created 2015-03-02
28,950 commits to master branch, last one 23 days ago
📚 RDocumentation provides an easy way to search the documentation for every version of every R package on CRAN and Bioconductor.
Created 2020-11-25
357 commits to master branch, last one about a month ago
57
224
gpl-3.0
6
Simple simulation of single-cell RNA sequencing data
Created 2016-10-04
930 commits to devel branch, last one 2 months ago
24
197
gpl-3.0
7
Reference-guided transcript discovery and quantification for long read RNA-Seq data
Created 2020-02-07
2,175 commits to devel branch, last one 6 days ago
81
192
other
21
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
Created 2014-03-28
3,898 commits to devel branch, last one 10 days ago
66
187
unknown
19
Bioconductor cheat sheet
Created 2012-12-03
96 commits to main branch, last one 5 months ago
19
182
gpl-3.0
12
Clone of the Bioconductor repository for the SingleR package.
Created 2019-06-19
792 commits to master branch, last one a day ago
55
173
unknown
8
Development repository for the Bioconductor package 'mixOmics '
Created 2018-10-04
1,285 commits to master branch, last one 6 days ago
25
168
unknown
6
Brings bulk and pseudobulk transcriptomics to the tidyverse
Created 2019-08-28
1,483 commits to master branch, last one 2 months ago
Conversion between scRNA-seq objects
Created 2020-06-08
481 commits to devel branch, last one 2 months ago
18
143
unknown
13
A grammar of genomic data transformation
Created 2017-08-28
617 commits to devel branch, last one 10 months ago
34
137
unknown
15
Transcript quantification import for modular pipelines
Created 2015-11-18
309 commits to devel branch, last one 11 months ago
Contribute Packages to Bioconductor
Created 2016-03-03
68 commits to devel branch, last one 19 days ago
35
131
other
8
MaAsLin2: Microbiome Multivariate Association with Linear Models
Created 2019-05-14
523 commits to master branch, last one 3 months ago
17
131
gpl-3.0
7
Convert between AnnData and SingleCellExperiment
Created 2019-02-20
206 commits to main branch, last one 5 days ago
46
130
unknown
14
Base Classes and Functions for Mass Spectrometry and Proteomics
Created 2010-10-02
4,037 commits to master branch, last one 3 months ago
Curated Metagenomic Data of the Human Microbiome
Created 2016-05-06
1,106 commits to devel branch, last one 20 days ago
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
Created 2017-03-02
808 commits to devel branch, last one 6 days ago
22
106
gpl-3.0
3
Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
Created 2015-10-07
67 commits to devel branch, last one about a month ago
The bridge between the NCBI Gene Expression Omnibus and Bioconductor
Created 2013-07-19
916 commits to main branch, last one 3 months ago
44
91
unknown
12
Orchestrating Microbiome Analysis
Created 2020-11-02
903 commits to devel branch, last one 9 days ago
Code for the spatialLIBD R/Bioconductor package and shiny app
Created 2019-12-04
786 commits to devel branch, last one 2 months ago
35
90
unknown
16
Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
Created 2012-09-10
614 commits to main branch, last one about a year ago
34
89
bsd-3-clause
20
Tools for manipulating annotated data matrices
Created 2017-03-28
275 commits to master branch, last one 3 years ago
Provide R access to the NCI Genomic Data Commons portal.
Created 2016-06-08
622 commits to devel branch, last one 9 days ago
10
86
artistic-2.0
5
From geospatial to spatial -omics
Created 2020-07-22
506 commits to main branch, last one 2 months ago
A small project to add ggplot2 extensions
Created 2019-04-15
182 commits to master branch, last one 4 years ago
Continuous integration for R packages. 🔀 Automates testing ✅, documentation website building 📦, & containerised deployment 🐳.
Created 2021-10-28
602 commits to master branch, last one 24 days ago