8 results found Sort:

YuLab-SMU
enrichplot YuLab-SMU
65
226
unknown
12
Visualization of Functional Enrichment Result
visualization pathway-analysis enrichment-analysis
Created 2017-11-23
573 commits to devel branch, last one 26 days ago
nsalomonis
altanalyze nsalomonis
30
98
apache-2.0
16
AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available fro...
python pagerank bam-files cell-cycle clustering rna-seq-data fastq-anaysis scrna-seq-data network-analysis pathway-analysis command-line-tool graphical-interface alternative-splicing marker-gene-analysis single-cell-splicing splicing-visualization bioinformatics-pipeline splicing-quantification cell-type-classification louvain-community-detection
Created 2015-08-08
237 commits to master branch, last one 2 years ago
federicomarini
GeneTonic federicomarini
8
75
other
6
Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
r gui shiny bioconductor rna-seq-data transcriptome user-friendly gene-expression transcriptomics data-exploration pathway-analysis rna-seq-analysis data-visualization bioconductor-package reproducible-research functional-enrichment-analysis
Created 2019-06-24
1,090 commits to devel branch, last one 7 days ago
igordot
msigdbr igordot
13
69
other
9
MSigDB gene sets for multiple organisms in a tidy data format
gsea msigdb genomics pathways gene-sets pathway-analysis enrichment-analysis
Created 2018-04-02
59 commits to main branch, last one about a year ago
jackbibby1
SCPA jackbibby1
6
58
gpl-3.0
2
R package for pathway analysis in scRNA-seq data
r-package single-cell gene-signatures transcriptomics pathway-analysis single-cell-rna-seq differential-expression
Created 2021-11-16
449 commits to main branch, last one 4 months ago
iVis-at-Bilkent
pathway-mapper iVis-at-Bilkent
28
55
agpl-3.0
12
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
tcga graphviz pathways bioinformatics cancer-genomics cancer-pathways systems-biology pathway-analysis network-visualization
Created 2016-05-27
834 commits to master branch, last one 6 months ago
iVis-at-Bilkent
newt iVis-at-Bilkent
27
53
lgpl-3.0
11
A web application to visualize and edit pathway models
sif newt sbgn sbml editor layout biology pathways celldesigner visualization bioinformatics pathway-models systems-biology pathway-analysis network-visualization web-based-visualization
Created 2017-01-24
1,758 commits to master branch, last one 27 days ago
cxli233
ggpathway cxli233
5
51
mit
2
A tutorial for pathway visualization using tidyverse, igraph, and ggraph
r pathway-analysis data-visualization
Created 2022-12-04
20 commits to main branch, last one about a year ago