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Genome browser and variant annotation
Created
2022-07-07
986 commits to master branch, last one 3 days ago
Learning the Sequence Alignment/Map format
Created
2016-04-15
94 commits to main branch, last one 12 months ago
AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available fro...
python
pagerank
bam-files
cell-cycle
clustering
rna-seq-data
fastq-anaysis
scrna-seq-data
network-analysis
pathway-analysis
command-line-tool
graphical-interface
alternative-splicing
marker-gene-analysis
single-cell-splicing
splicing-visualization
bioinformatics-pipeline
splicing-quantification
cell-type-classification
louvain-community-detection
Created
2015-08-08
237 commits to master branch, last one 2 years ago
Sequence alignment tools
Created
2017-06-15
180 commits to master branch, last one 7 months ago
Multi-sample somatic variant caller
Created
2015-06-16
981 commits to master branch, last one 5 years ago
create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks
Created
2023-10-05
51 commits to master branch, last one 7 months ago