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JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
Created
2009-01-16
8,129 commits to master branch, last one about a year ago
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
Created
2014-09-26
532 commits to bloody branch, last one 4 years ago
Genome browser and variant annotation
Created
2022-07-07
727 commits to master branch, last one 3 months ago
Ultrafast Sample Placement on Existing Trees
Created
2020-09-16
1,977 commits to master branch, last one about a month ago
Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
rgi
barrnap
phigaro
nextflow
pipeline
prophages
annotation
ko-annotation
genome-browser
genome-analysis
rrna-prediction
virulence-genes
virulence-factor
insertion-sequences
reproducible-research
methylation-annotation
mobile-genetic-elements
genomic-islands-prediction
prophage-sequences-prediction
antimicrobial-genes-annotation
Created
2019-10-23
740 commits to master branch, last one 3 months ago
Modular Multi-scale Integrated Genome Graph Browser
Created
2018-02-06
384 commits to master branch, last one 11 days ago
WashU Epigenome Browser
Created
2017-07-26
1,301 commits to master branch, last one about a month ago