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19

126

unknown

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SGS, is a user-friendly, collaborative and versatile browser for visualizing single-cell and spatial multiomics data.

sgs zarr schic scrna mudata scatac sceqtl anndata scmethylc multimodal single-cell spatial-omics visualization genome-browser

Created 2024-07-01

59 commits to main branch, last one about a month ago

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59

unknown

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A course on genomics and bioinformatics from WU

dna rna scrna rnaseq atacseq biology chipseq dataviz analysis genomics alignment sequencing single-cell bioinformatics

Created 2020-08-19

587 commits to master branch, last one 2 days ago

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agpl-3.0

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Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Genome Biology

scrna t-sne glm-pca umi-count normalization gene-selection umi-count-matrix negative-binomial single-cell-rna-seq single-cell-analysis negative-binomial-model dimensionality-reduction negative-binomial-regression

Created 2020-10-15

56 commits to main branch, last one 2 years ago