6 results found Sort:

tariqdaouda
pyGeno tariqdaouda
50
311
apache-2.0
25
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
bed gtf vcf snps cancer genome biology ensembl genomes medical genomics medicine csv-parser proteomics bioinformatics cancer-genomes genome-browser cancer-genomics genome-annotation genome-sequencing
Created 2014-09-26
532 commits to bloody branch, last one 4 years ago
AIRI-Institute
GENA_LM AIRI-Institute
18
174
mit
8
GENA-LM is a transformer masked language model trained on human DNA sequence.
dna t2t genomes language-model
Created 2022-06-20
23 commits to main branch, last one about a month ago
refresh-bio
agc refresh-bio
13
154
mit
7
Assembled Genomes Compressor
genomes compression
Created 2021-12-22
31 commits to main branch, last one 8 months ago
pirovc
genome_updater pirovc
15
146
mit
1
Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redundancy
bash ncbi genome refseq genbank genomes database download genomics sequence bioinformatics
Created 2017-05-11
164 commits to master branch, last one 10 months ago
broadinstitute
gnomad_methods broadinstitute
28
89
mit
25
Hail helper functions for the gnomAD project and Translational Genomics Group
hail exomes genomes genomics
Created 2017-09-28
3,070 commits to main branch, last one 20 days ago
kjolley
BIGSdb kjolley
20
61
other
9
Bacterial Isolate Genome Sequence Database (BIGSdb): A platform for gene-by-gene bacterial population annotation and analysis.
mlst typing genomes bacteria database bioinformatics
Created 2014-06-06
7,382 commits to develop branch, last one 4 hours ago