6 results found Sort:

tariqdaouda
pyGeno tariqdaouda
52
308
apache-2.0
25
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
bed gtf vcf snps cancer genome biology ensembl genomes medical genomics medicine csv-parser proteomics bioinformatics cancer-genomes genome-browser cancer-genomics genome-annotation genome-sequencing
Created 2014-09-26
532 commits to bloody branch, last one 4 years ago
AIRI-Institute
GENA_LM AIRI-Institute
13
153
mit
8
GENA-LM is a transformer masked language model trained on human DNA sequence.
dna t2t genomes language-model
Created 2022-06-20
21 commits to main branch, last one 7 months ago
refresh-bio
agc refresh-bio
13
150
mit
7
Assembled Genomes Compressor
genomes compression
Created 2021-12-22
31 commits to main branch, last one 3 months ago
pirovc
genome_updater pirovc
13
135
mit
1
Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redundancy
bash ncbi genome refseq genbank genomes database download genomics sequence bioinformatics
Created 2017-05-11
164 commits to master branch, last one 5 months ago
broadinstitute
gnomad_methods broadinstitute
26
82
mit
26
Hail helper functions for the gnomAD project and Translational Genomics Group
hail exomes genomes genomics
Created 2017-09-28
2,946 commits to main branch, last one 9 days ago
kjolley
BIGSdb kjolley
19
56
other
8
Bacterial Isolate Genome Sequence Database (BIGSdb): A platform for gene-by-gene bacterial population annotation and analysis.
mlst typing genomes bacteria database bioinformatics
Created 2014-06-06
7,213 commits to develop branch, last one a day ago