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Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
rgi
barrnap
phigaro
nextflow
pipeline
prophages
annotation
ko-annotation
genome-browser
genome-analysis
rrna-prediction
virulence-genes
virulence-factor
insertion-sequences
reproducible-research
methylation-annotation
mobile-genetic-elements
genomic-islands-prediction
prophage-sequences-prediction
antimicrobial-genes-annotation
Created
2019-10-23
769 commits to master branch, last one 4 months ago