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155

mit

nim wrapper for htslib for parsing genomics data files

nim htslib genomics nim-lang bioinformatics high-throughput-sequencing

Created 2017-08-15

383 commits to master branch, last one 3 months ago

148

bsd-3-clause

Python library to access Gene Expression Omnibus Database (GEO)

htseq rna-seq microarray geo-database bioinformatics rna-sequencing high-throughput-sequencing

Created 2015-08-16

238 commits to master branch, last one 8 months ago

bsd-2-clause

VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications

genomics simulation validation high-throughput-sequencing

Created 2014-05-12

1,428 commits to master branch, last one 2 years ago

mit

Sequence alignment tools

biology biojulia bam-files sam-files dna-sequences bioinformatics sequence-analysis sequence-alignment smith-waterman-alignment high-throughput-sequencing

Created 2017-06-15

180 commits to master branch, last one 4 months ago

gpl-3.0

Find and visualize rearrangements in DNA sequences

dna-sequences alignment-free data-visualization genome-compression genome-rearrangment high-throughput-sequencing

Created 2018-02-02

2,108 commits to master branch, last one 8 months ago