6 results found Sort:

samtools
htslib samtools
447
782
other
63
C library for high-throughput sequencing data formats
bam bcf ngs sam vcf cram htslib bioinformatics
Created 2012-05-15
3,262 commits to develop branch, last one 6 days ago
seqan
seqan seqan
171
461
other
43
SeqAn's official repository.
bwt simd blast cpp14 fasta seqan htslib sam-bam indexing alignment suffixarray fastq-format bioinfomatics high-performance sequence-alignments
Created 2012-10-25
8,285 commits to main branch, last one 2 months ago
brentp
cyvcf2 brentp
70
361
mit
7
cython + htslib == fast VCF and BCF processing
vcf cython htslib genomics bioinformatics
Created 2015-08-12
527 commits to main branch, last one 8 days ago
brentp
hts-nim brentp
26
154
mit
10
nim wrapper for htslib for parsing genomics data files
nim htslib genomics nim-lang bioinformatics high-throughput-sequencing
Created 2017-08-15
382 commits to master branch, last one 3 months ago
Illumina
paragraph Illumina
28
146
other
19
Graph realignment tools for structural variants
vcf htslib genotyping variant-calling structural-variation
Created 2017-11-24
33 commits to master branch, last one about a year ago
walaj
SeqLib walaj
36
133
other
19
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
fermi htslib bwa-mem c-plus-plus sequence-alignments
Created 2015-05-07
616 commits to master branch, last one about a month ago