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Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
Created
2015-04-17
5,632 commits to develop branch, last one 8 days ago
A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
Created
2015-03-30
6,156 commits to master branch, last one 20 hours ago
Workflow Description Language - Specification and Implementations
Created
2012-08-01
704 commits to wdl-1.2 branch, last one 2 months ago
📦 Package manager for REAPER
Created
2015-11-22
1,593 commits to master branch, last one about a month ago
Workflow Description Language developer tools & local runner
Created
2018-08-11
879 commits to main branch, last one 4 months ago
Long read production pipelines
Created
2019-05-14
541 commits to main branch, last one 13 days ago
Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DNAnexus webinars, online trainings and workshops.
Created
2021-11-01
81 commits to main branch, last one 4 months ago
An app store for scientific workflows, tools, notebooks, and services
Created
2015-04-03
3,856 commits to develop branch, last one 10 days ago
A collection of reusable WDL tasks. Category:Other
Created
2018-03-12
2,452 commits to develop branch, last one 14 days ago
The WES API is a standard way to run and manage portable workflows.
Created
2016-03-29
301 commits to develop branch, last one about a year ago
Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ doc...
Created
2016-07-14
4,023 commits to master branch, last one 12 days ago
Configure workflow/pipeline tests using yaml files.
Created
2018-12-05
1,234 commits to develop branch, last one 6 months ago
CLI for interacting with Cromwell servers
Created
2018-03-29
153 commits to main branch, last one 8 months ago
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
Created
2023-12-17
48 commits to main branch, last one 20 days ago
Rust crates for working with Workflow Description Language (WDL) documents.
Created
2023-10-30
282 commits to main branch, last one 11 days ago