nf-core / sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Date Created 2019-04-30 (5 years ago)
Commits 7,941 (last one 11 hours ago)
Stargazers 422 (0 this week)
Watchers 134 (0 this week)
Forks 428
License mit
Ranking

RepositoryStats indexes 616,225 repositories, of these nf-core/sarek is ranked #106,048 (83rd percentile) for total stargazers, and #12,331 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #3/83.

nf-core/sarek is also tagged with popular topics, for these it's ranked: bioinformatics (#98/833),  containers (#304/785),  workflow (#203/746),  pipeline (#89/449),  genomics (#39/321),  annotation (#45/181)

Other Information

nf-core/sarek has 37 open pull requests on Github, 832 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 280 open issues and 471 closed issues.

There have been 27 releases, the latest one was published on 2024-12-12 (2 months ago) with the name 3.5.0 - Áhkájiegna.

Homepage URL: https://nf-co.re/sarek

Star History

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Watcher History

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Recent Commit History

5,804 commits on the default branch (master) since jan '22

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Issue History

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Languages

The primary language is Nextflow but there's also others...

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updated: 2025-02-18 @ 04:58pm, id: 184289291 / R_kgDOCvwICw