nf-core / sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Date Created 2019-04-30 (5 years ago)

Commits 7,940 (last one 9 days ago)

Stargazers 412 (0 this week)

Watchers 135 (0 this week)

Forks 417

License mit

Ranking

RepositoryStats indexes 595,856 repositories, of these nf-core/sarek is ranked #105,784 (82nd percentile) for total stargazers, and #12,128 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #3/78.

nf-core/sarek is also tagged with popular topics, for these it's ranked: bioinformatics (#103/814), containers (#306/774), workflow (#200/724), pipeline (#90/442), genomics (#40/318), annotation (#45/176)

Other Information

nf-core/sarek has 33 open pull requests on Github, 826 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 265 open issues and 464 closed issues.

There have been 27 releases, the latest one was published on 2024-12-12 (9 days ago) with the name 3.5.0 - Áhkájiegna.

Homepage URL: https://nf-co.re/sarek

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5,804 commits on the default branch (master) since jan '22

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updated: 2024-12-21 @ 12:18pm, id: 184289291 / R_kgDOCvwICw