nf-core / sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Date Created 2019-04-30 (5 years ago)

Commits 7,534 (last one 2 months ago)

Stargazers 410 (2 this week)

Watchers 134 (0 this week)

Forks 418

License mit

Ranking

RepositoryStats indexes 584,353 repositories, of these nf-core/sarek is ranked #104,986 (82nd percentile) for total stargazers, and #12,203 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #3/77.

nf-core/sarek is also tagged with popular topics, for these it's ranked: bioinformatics (#100/789), containers (#304/771), workflow (#197/716), pipeline (#89/437), genomics (#40/312), annotation (#45/172)

Other Information

nf-core/sarek has 35 open pull requests on Github, 810 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 261 open issues and 463 closed issues.

There have been 26 releases, the latest one was published on 2024-09-03 (2 months ago) with the name Sarek 3.4.4 - Ruopsokjåkhå.

Homepage URL: https://nf-co.re/sarek

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5,398 commits on the default branch (master) since jan '22

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updated: 2024-11-20 @ 05:46pm, id: 184289291 / R_kgDOCvwICw