Statistics for language Nextflow
RepositoryStats tracks 638,566 Github repositories, of these 90 are reported to use a primary language of Nextflow.
Most starred repositories for language Nextflow (view more)
Trending repositories for language Nextflow (view more)
Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
Repository to host tool-specific module files for the Nextflow DSL2 community!
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Repository to host tool-specific module files for the Nextflow DSL2 community!
An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.
Stochastic Testing and Input Manipulation for Unbiased Learning Systems
A Nextflow pipeline for evaluating assembly quality
Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation
A single cell transcriptomics pipeline for QC, integration and making the data presentable
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Repository to host tool-specific module files for the Nextflow DSL2 community!
Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation
Stochastic Testing and Input Manipulation for Unbiased Learning Systems
Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research
An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.
A Nextflow pipeline for evaluating assembly quality