nf-core / scrnaseq

A single-cell RNAseq pipeline for 10X genomics data

Date Created 2019-04-08 (5 years ago)

Commits 1,612 (last one 11 days ago)

Stargazers 218 (0 this week)

Watchers 136 (0 this week)

Forks 175

License mit

Ranking

RepositoryStats indexes 595,856 repositories, of these nf-core/scrnaseq is ranked #170,132 (71st percentile) for total stargazers, and #12,003 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #7/78.

nf-core/scrnaseq is also tagged with popular topics, for these it's ranked: workflow (#283/724), pipeline (#140/442)

Other Information

nf-core/scrnaseq has 5 open pull requests on Github, 178 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 51 open issues and 130 closed issues.

There have been 16 releases, the latest one was published on 2024-12-10 (11 days ago) with the name 3.0.0.

Homepage URL: https://nf-co.re/scrnaseq

All Topics

alevin nf-core rna-seq bustools kallisto nextflow pipeline workflow star-solo cellranger 10xgenomics single-cell 10x-genomics

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Github watchers over time, collection started in '23

Recent Commit History

1,230 commits on the default branch (master) since jan '22

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Languages

The primary language is Nextflow but there's also others...

updated: 2024-12-21 @ 09:49am, id: 180151993 / R_kgDOCrzmuQ