nf-core / scrnaseq

Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-droplet detection

Date Created 2019-04-08 (5 years ago)
Commits 1,612 (last one 2 months ago)
Stargazers 248 (2 this week)
Watchers 137 (0 this week)
Forks 179
License mit
Ranking

RepositoryStats indexes 616,225 repositories, of these nf-core/scrnaseq is ranked #158,509 (74th percentile) for total stargazers, and #11,955 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #6/83.

nf-core/scrnaseq is also tagged with popular topics, for these it's ranked: workflow (#269/746),  pipeline (#127/449)

Other Information

nf-core/scrnaseq has 2 open pull requests on Github, 192 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 52 open issues and 135 closed issues.

There have been 16 releases, the latest one was published on 2024-12-10 (2 months ago) with the name 3.0.0.

Homepage URL: https://nf-co.re/scrnaseq

Star History

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Watcher History

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Recent Commit History

1,230 commits on the default branch (master) since jan '22

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Issue History

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Languages

The primary language is Nextflow but there's also others...

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updated: 2025-02-17 @ 08:31pm, id: 180151993 / R_kgDOCrzmuQ