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nf-core
sarek nf-core
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mit
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Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
conda gatk4 cancer nf-core somatic genomics germline nextflow pipeline workflow annotation containers target-panels bioinformatics pre-processing variant-calling reproducible-research whole-exome-sequencing whole-genome-sequencing next-generation-sequencing
Created 2019-04-30
7,941 commits to master branch, last one about a month ago