nf-core / rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Date Created 2018-03-29 (6 years ago)

Commits 5,670 (last one 13 days ago)

Stargazers 903 (4 this week)

Watchers 156 (0 this week)

Forks 705

License mit

Ranking

RepositoryStats indexes 579,238 repositories, of these nf-core/rnaseq is ranked #55,691 (90th percentile) for total stargazers, and #9,840 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #1/75.

nf-core/rnaseq is also tagged with popular topics, for these it's ranked: workflow (#130/709), pipeline (#58/432)

Other Information

nf-core/rnaseq has 13 open pull requests on Github, 659 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 58 open issues and 604 closed issues.

There have been 34 releases, the latest one was published on 2024-10-24 (13 days ago) with the name nf-core/rnaseq v3.17.0 - Neon Newt.

Homepage URL: https://nf-co.re/rnaseq

All Topics

rna nf-core rna-seq nextflow pipeline workflow

Star History

Github stargazers over time

Watcher History

Github watchers over time, collection started in '23

Recent Commit History

2,083 commits on the default branch (master) since jan '22

Yearly Commits

Commits to the default branch (master) per year

Issue History

Languages

The primary language is Nextflow but there's also others...

updated: 2024-11-07 @ 08:34am, id: 127293091 / R_kgDOB5ZWow