nf-core / rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Date Created 2018-03-29 (6 years ago)
Commits 5,806 (last one 2 months ago)
Stargazers 984 (2 this week)
Watchers 159 (0 this week)
Forks 721
License mit
Ranking

RepositoryStats indexes 617,630 repositories, of these nf-core/rnaseq is ranked #53,070 (91st percentile) for total stargazers, and #9,707 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #1/84.

nf-core/rnaseq is also tagged with popular topics, for these it's ranked: workflow (#125/748),  pipeline (#55/450)

Other Information

nf-core/rnaseq has 11 open pull requests on Github, 682 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 73 open issues and 619 closed issues.

There have been 35 releases, the latest one was published on 2024-12-20 (2 months ago) with the name nf-core/rnaseq v3.18.0 - Lithium Lynx.

Homepage URL: https://nf-co.re/rnaseq

Star History

Github stargazers over time

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Watcher History

Github watchers over time, collection started in '23

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Recent Commit History

2,219 commits on the default branch (master) since jan '22

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Yearly Commits

Commits to the default branch (master) per year

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Issue History

Total Issues
Open Issues
Closed Issues
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Languages

The primary language is Nextflow but there's also others...

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updated: 2025-02-19 @ 04:57am, id: 127293091 / R_kgDOB5ZWow