nf-core / taxprofiler

Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

Date Created 2022-02-18 (3 years ago)

Commits 2,145 (last one 8 days ago)

Stargazers 139 (1 this week)

Watchers 156 (3 this week)

Forks 45

License mit

Ranking

RepositoryStats indexes 629,376 repositories, of these nf-core/taxprofiler is ranked #244,575 (61st percentile) for total stargazers, and #10,014 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #17/87.

nf-core/taxprofiler is also tagged with popular topics, for these it's ranked: bioinformatics (#313/843), workflow (#388/757), classification (#259/570), pipeline (#199/458), profiling (#100/173)

Other Information

nf-core/taxprofiler has 5 open pull requests on Github, 334 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 40 open issues and 172 closed issues.

There have been 15 releases, the latest one was published on 2025-03-13 (8 days ago) with the name v1.2.3 - Bouncy Basenji Patch.

Homepage URL: https://nf-co.re/taxprofiler

All Topics

nf-core shotgun illumina nanopore nextflow pathogen pipeline workflow profiling long-reads microbiome metagenomics bioinformatics classification taxonomic-profiling taxonomic-classification

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Github watchers over time, collection started in '23

Recent Commit History

2,145 commits on the default branch (master) since jan '22

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Languages

The primary language is Nextflow but there's also others...

updated: 2025-03-21 @ 04:45pm, id: 460743550 / R_kgDOG3Zjfg