nf-core / taxprofiler

Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

Date Created 2022-02-18 (2 years ago)

Commits 2,031 (last one 23 days ago)

Stargazers 132 (0 this week)

Watchers 155 (0 this week)

Forks 37

License mit

Ranking

RepositoryStats indexes 595,856 repositories, of these nf-core/taxprofiler is ranked #243,391 (59th percentile) for total stargazers, and #9,999 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #17/78.

nf-core/taxprofiler is also tagged with popular topics, for these it's ranked: bioinformatics (#316/814), workflow (#381/724), classification (#254/543), pipeline (#200/442), profiling (#99/164)

Other Information

nf-core/taxprofiler has 6 open pull requests on Github, 310 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 39 open issues and 167 closed issues.

There have been 13 releases, the latest one was published on 2024-11-28 (23 days ago) with the name v1.2.1 - Bouncy Basenji Patch [2024-11-28].

Homepage URL: https://nf-co.re/taxprofiler

All Topics

nf-core shotgun illumina nanopore nextflow pathogen pipeline workflow profiling long-reads microbiome metagenomics bioinformatics classification taxonomic-profiling taxonomic-classification

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2,031 commits on the default branch (master) since jan '22

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Languages

The primary language is Nextflow but there's also others...

updated: 2024-12-21 @ 01:37am, id: 460743550 / R_kgDOG3Zjfg