nf-core / taxprofiler

Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

Date Created 2022-02-18 (2 years ago)

Commits 1,985 (last one about a month ago)

Stargazers 128 (0 this week)

Watchers 153 (0 this week)

Forks 34

License mit

Ranking

RepositoryStats indexes 579,555 repositories, of these nf-core/taxprofiler is ranked #243,752 (58th percentile) for total stargazers, and #10,118 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #17/75.

nf-core/taxprofiler is also tagged with popular topics, for these it's ranked: bioinformatics (#320/786), workflow (#378/710), classification (#253/534), pipeline (#201/432)

Other Information

nf-core/taxprofiler has 4 open pull requests on Github, 303 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 42 open issues and 162 closed issues.

There have been 12 releases, the latest one was published on 2024-10-03 (about a month ago) with the name v1.2.0 - Bouncy Basenji [2024-10-03].

Homepage URL: https://nf-co.re/taxprofiler

All Topics

nf-core shotgun illumina nanopore nextflow pathogen pipeline workflow profiling long-reads microbiome metagenomics bioinformatics classification taxonomic-profiling taxonomic-classification

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1,985 commits on the default branch (master) since jan '22

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Languages

The primary language is Nextflow but there's also others...

updated: 2024-11-06 @ 05:11pm, id: 460743550 / R_kgDOG3Zjfg